Gene Swit_0572 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_0572 
Symbol 
ID5200584 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp623882 
End bp624238 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content75% 
IMG OID640580115 
Producthypothetical protein 
Protein accessionYP_001261078 
Protein GI148553496 
COG category[L] Replication, recombination and repair 
COG ID[COG0792] Predicted endonuclease distantly related to archaeal Holliday junction resolvase 
TIGRFAM ID[TIGR00252] conserved hypothetical protein TIGR00252 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.421068 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAACCGCC GCGCCGCCGC CGAGCGGCAG GGCCGCACCG GCGAGCGCAT CGCCGCCTGG 
TGGCTGCGCC TGCACGGCTG GCGGATCGTC GGCAGCCGGG TGAAGACCCG GCGCGGCGAG
GTCGACCTGA TCGCGAGGCG CGGCCGGACG CTCGCCTTCG TCGAGGTCAA GACGCGCGGC
GACGCCGCCG GGCTCGCCAC CGCGATCGAC GAATACCGGC TCCGCCGCGT CGCCGCCGCG
GCCGAGGCTC TGCTGCCGCG CTATGGCGTG GGCGTCGAGA ATGTGCGGAT CGACGTGATG
CTGGTCCGCC CCTGGCGACG GCCCGTGCAC CTGACGAATG TGTGGCACGG CCAATGA
 
Protein sequence
MNRRAAAERQ GRTGERIAAW WLRLHGWRIV GSRVKTRRGE VDLIARRGRT LAFVEVKTRG 
DAAGLATAID EYRLRRVAAA AEALLPRYGV GVENVRIDVM LVRPWRRPVH LTNVWHGQ