| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0542 |
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| Symbol | |
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| ID | 5200649 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 595563 |
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| End bp | 597623 |
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| Gene Length | 2061 bp |
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| Protein Length | 686 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 640580083 |
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| Product | cytochrome c biogenesis protein, transmembrane region |
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| Protein accession | YP_001261048 |
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| Protein GI | 148553466 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4232] Thiol:disulfide interchange protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATCGA TCGGCCGCCT GATTCCCCTG TTCGTCGCCC TGCTGCTGGC CGTGGCGGGC
GCCGGCGCCG CCCCGGCCGC GCATATCAGG GCGGTGCTGG AGGCGGAGAC GCTGCGCCCG
GCCGCCGGCA GCCGCATCAC CCTGGCGCTC GGCATGACGC CCGAGCGCGA CTGGCACGGC
TATTGGCTGA ACCCCGGCGA CGCGGGCGCG CCCGCCGACA TCGCCTGGAC GCTGCCGCGC
GGGGCGACGG TCGGCCCGTT GCGCTATCCG GTGCCGCAGC GGCTGATCGT CCAGGGGCTG
ATGAACTATG TCTATGAGCG GCCCTATGCG CTGCTGATGA CGCTGACCGT GCCCAAGGGG
CTCGCCCCCG GCACGCCGCT GCGCATCGCC GGCAAGGCCC GCTGGCTCGC CTGCTCGCCG
ACGATCTGCG TGCCCGAGCA GGGGCCGGTC GCGATCGACC TGACGGTCGG CGACGGCGCG
GTGACGGCGG CGTCGCGCGC GCGCTTCGAC GCATGGCGGG CGAAGCTGCC GATGCCGCTG
GGACAGACGG CGAGCTTCGA GGCGAAGCCG GGCAAGCTGC GCCTCGCCAT TCCCTTCCCC
AAGGGCCGGC CCGTCACGGC GCCCTATTTC TACCCCGCCA CCGACGGGGT CGCCGACTAT
GCCGCGCCGC AGGCGATCAG CCGCCGCGGC GACCGCCTGA TCGTCGAGAT CAAGGCGGCG
CGGAACCCGC AGCCGGTGCA GGCGATCGAG GGGCTGATCG CGATCGGGCC CGACCGGGGC
CTGATGGTGA CGGCCCGGCC CGGCCCGGTG CCCGCAGCGG GCGTGCCGAT CGCCGGCGCG
GGCGACGAGG CCGGGGAGGG GGGCGGCTGG CGCACCTTCC TGCTCGCGCT CGGCGGCGCC
CTGCTCGGCG GGCTGCTGCT CAACGCCATG CCCTGCGTCT TCCCGATCCT CAGCCTCAAG
GCGCTGAGCC TCGCGCGCAG CGGCGAGACC GATCGCCACG CCCGGGTCGA GGCGCTCGCC
TATACCGCCG GGATCGTGCT GAGCTGCGTC GCTCTCGGGC TGCTGCTGCT CGGCCTGCGC
GCGGGCGGCG CGGCGGCGGG CTGGGGTTTC CAGTTGCAGG ACCCACGGAT GGTGTTCGTC
CTGCTGCTGC TCGTCACCGC GATCAGCCTC AACCTCGCCG GCCTGTTCGA GCTGCGCGTG
GTCGGCATCG GCGAGGCGAT GACCAAGGGG CGCGGCGCGC TCCCCGCCTT CTGGACCGGC
GTGCTCGCGG CGCTGGTGGC GACGCCGTGC AGCGGCCCGT TCATGGCGGG CGCGGTCGGC
GCCGCGTTGC TGCTGCCTCC GGCCGCCGCG CTGGCGGTGT TCGCCGGGCT CGGCCTGGGC
CTGGCGCTGC CCTTCCTACT GGTCGGCTTC GTGCCGGCGC TGCGCCGCCT GTTGCCGAAG
CCGGGCGCCT GGATGGACCG GCTGCGCCGC ATCCTCTCGG TCCCGATGTT CCTGACCGCG
CTCGGCCTCG CCTGGGTGCT GGGCCAGCAG GCCGGGGTCG ATCGCCTGGT GCAGGGGGTC
GGCGCGGCGC TGCTGCTCGG CCTCGCGCTC TGGTGGGTCG GCGCGCGGCA GGCGCAGGGC
AAGCGGTACA GCTGGATTCC GGTGGCGCCG GTGCTCGCCG CCGCGCTGGC GCTGCTGCTC
GTCACTCCGT CGGGCGGCAG CCCGGCCGCC GCGGCGCCTG CGGGCGAGGC CGGCGCGGAA
CCGTTCAGCG AGGCGCGCCT CGCCGCGCTC CAGGCACAGA AGAAGCCGGT CTTCCTCTAT
TTCACCGCCG ACTGGTGCCT GACCTGCAAG GTCAATGAGA AGGCGGCGAT CGAGCGGCCC
GCGGTGCGCG AGGCGTTCGA CCGGGCCGGC GTCGTGGTGA TGGTCGGCGA CTGGACCAAC
GGCGATCCCG CGATCGGCCG CTTCCTCGAG GCGCAGGGGC GTTCGGGCGT GCCGCTCTAC
CTGTTCTACG ACAAGGACGG GCGGCAGGAG ACGCTGCCCC AGCTGCTGAC CCCGGCGACG
CTCACCGCGC TCGCGGCCTG A
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| Protein sequence | MTSIGRLIPL FVALLLAVAG AGAAPAAHIR AVLEAETLRP AAGSRITLAL GMTPERDWHG
YWLNPGDAGA PADIAWTLPR GATVGPLRYP VPQRLIVQGL MNYVYERPYA LLMTLTVPKG
LAPGTPLRIA GKARWLACSP TICVPEQGPV AIDLTVGDGA VTAASRARFD AWRAKLPMPL
GQTASFEAKP GKLRLAIPFP KGRPVTAPYF YPATDGVADY AAPQAISRRG DRLIVEIKAA
RNPQPVQAIE GLIAIGPDRG LMVTARPGPV PAAGVPIAGA GDEAGEGGGW RTFLLALGGA
LLGGLLLNAM PCVFPILSLK ALSLARSGET DRHARVEALA YTAGIVLSCV ALGLLLLGLR
AGGAAAGWGF QLQDPRMVFV LLLLVTAISL NLAGLFELRV VGIGEAMTKG RGALPAFWTG
VLAALVATPC SGPFMAGAVG AALLLPPAAA LAVFAGLGLG LALPFLLVGF VPALRRLLPK
PGAWMDRLRR ILSVPMFLTA LGLAWVLGQQ AGVDRLVQGV GAALLLGLAL WWVGARQAQG
KRYSWIPVAP VLAAALALLL VTPSGGSPAA AAPAGEAGAE PFSEARLAAL QAQKKPVFLY
FTADWCLTCK VNEKAAIERP AVREAFDRAG VVVMVGDWTN GDPAIGRFLE AQGRSGVPLY
LFYDKDGRQE TLPQLLTPAT LTALAA
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