| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0535 |
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| Symbol | |
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| ID | 5200662 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 583114 |
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| End bp | 585540 |
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| Gene Length | 2427 bp |
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| Protein Length | 808 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640580076 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001261041 |
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| Protein GI | 148553459 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAACTC GAATGACGAA GCTGAGCGGC GCGGTCGCGC TGATCATGGC GGGAACGGCG
ATGACGCCGG CGCTGGCCCA GGGAGCCACG GACTCGGACG CCAATTATCG CGACGAGATC
ATCGTCACCG CGCAGAAGCG CGAAGAGAAT ATGCAGAAGG TGCCGATCCC CATGCAGGCG
CTGGGCACCG CCAAGCTCGA ACAATATAAT GTCAGCAATT TCAACGACTA CACGAAGCTT
CTTCCCAGCC TTTCCTTCCA GTCCGGCCAG CCCGGCAACG CCAAGGTCTA TTTCCGCGGC
GTGACCAGCG GCGGCGACGG CAACCATTCG GGCTCGCTGC CCTCGGTCGG CATCTATCTC
GACGAGCAGC CGATCACGAC GATCGACGGC GCGCTCGACA TCCACATCTA CGACATCGCC
CGCATCGAGG CGCTGTCGGG GCCGCAGGGC ACGCTCTACG GCGCCTCGTC GCAGGCCGGC
ACGATCCGCA TCATCACCAA CAAGCCCGAC CCGAGCGGCT TCGCCGCCGG CTTCGACGCC
GACATCAACA AGGTCAGCCA TGGCGCGGTG GGCGGCAAGC TCGAGGGTTT CGTCAACCAG
CCGCTGTCCG ACGCCGCAGC GCTGCGCGTC GTCGGCTGGT ACCAGCGCGA CGCCGGCTTC
ATCGACAATG TCCCGGGCAC GCGGACCTTC GGCACCGGCG TCACGATCAA CAACGCCGCC
GACGTCAAGA AGAACTACAA CCGGTCGACC GTGATCGGCG GCCGCGCCGC GCTCGGCATC
GAAATCGACG ACAACTGGAC CGTCACGCCG ACGATCTTCT ACCAGGACCA GGTCAACAAC
GGCTTCTTCG GCTATGATCC GAGCGTCGGC GACCTGAAGG TCCAGCATTT CGGCCGGGAG
CGCTTCCATG ACCGCTACTG GCAGGCCGCG CTGACCGTCC AGGGCAAGAT CGCCGACTTC
GACATCACCT ATGCCGGCGC CTATCTCGAC CGCCATATCG ACGCGGTCAG CGACTATACC
GACTATGCCG TCACCTACGA CAATCTCTAC GCGGGCGGAT TCTCGGGCTA TTTCACCGAC
AATGCGGGCA ATTACATCGA TCCCAGCCAG CACATCGCCG GACGCGACCA TTTCACCAAG
AACAGCCAGG AGCTCCGCAT CTCCTCGCCG TCCGACAAGC GCTTCCGCGT GCTCGCCGGC
CTATTCTACC AGCGCCAGAC CCACGACATC CTGCAGGACT ACCAGATCTT CGGGCTCGCC
GACGCGACCT CGGTGAACGG GCGGCCCGGC ACGATCTGGC TGACCAAGCA GTTCCGCGTC
GACAAGGACT ATGCCGCCTT CGGCGAGGCG TCGTTCGACA TCGTCCCCGA CAAGCTGACC
CTCACCGGCG GCCTGCGCGC GTTCAAGTAC AACAACTCGC TGGTCGGCTT CTTCGGCTTC
GGCGACGGCT ATTCGAGCCG GACCGGCGTC GCGGCCTGCT TCACGGACGC GAACGGGAAT
TATGTCGGCA CGCTGCTGCC GGGGGCGCCG TGCAACAATC TCGGCGTGGT GTCCGGCAAT
AACGTGCTTC CCAAGCGGGT GAAGGGCAAC GGCACCACCC ACCGCCTCAA CCTGACCTGG
AAGCCGACCG ACGACCTGAT GGTCTACGCC ACCTGGTCGC GCGGCTTCCG TCCGGGCGGC
ATCAACCGCC GCGGCACCAT CCCGCCCTAC AGCCCCGACT ATCTGACCAA CTATGAACTG
GGCTGGAAGA CGACCTGGCT CGACGGCAAG CTGCGGATCA ACGGCGCGCT GTTCTGGGAG
GAATGGAAGA AGTTCCAATT CTCCTTCCTC GGCGCGAACA GCTTCACCGA GATCCACAAC
GGACCCAATG CGCGCAGCAA GGGCATCGAG CTGGACTTCA CCTTCCGCCC GATCGAGGGG
CTGACGCTGA TCGGCAGCGG TGCCTATACC GACGCCAAGA CGCGGCAGAA CCTGTGCGGG
ATCGACGATC CGACCTATAG CTGCGCGGGC GCCGGCAACT TCATCTCCGC GCCGAAGGGC
ACGCGCCTGC CGATCACGTC GAAATGGCGC TACGGCGGCA CCGCGCGCTA TGACTTCGAC
ATGGGCGGCA AGTATCAGCC CTATGTCCAG GGCACGATGA CCTATGCCAG CTCGGCCTCG
TCGGACATCC GGACGCTGAT CTTCGATCCG AACGGCAACC CGGTCAATCC GGCGGCGCTG
ACCGGCAAGC TGCGCTCCTA CGCGATCTTC GACTTCTCGG CCGGCGCCAA ATTCGGCCGC
TGGACCTGGG AGGCCTATGT CGAGAACGCG TTCGACAAGC GGGCGCAGAA GACCCGCCTC
GTCACCTGCG GCCAGTGCTT CGACCGGCCC TATGTCTTCC CCAACACGCC GCAGACGATC
GGCATGCGGA TCGGCTGGAA ATATTGA
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| Protein sequence | MRTRMTKLSG AVALIMAGTA MTPALAQGAT DSDANYRDEI IVTAQKREEN MQKVPIPMQA
LGTAKLEQYN VSNFNDYTKL LPSLSFQSGQ PGNAKVYFRG VTSGGDGNHS GSLPSVGIYL
DEQPITTIDG ALDIHIYDIA RIEALSGPQG TLYGASSQAG TIRIITNKPD PSGFAAGFDA
DINKVSHGAV GGKLEGFVNQ PLSDAAALRV VGWYQRDAGF IDNVPGTRTF GTGVTINNAA
DVKKNYNRST VIGGRAALGI EIDDNWTVTP TIFYQDQVNN GFFGYDPSVG DLKVQHFGRE
RFHDRYWQAA LTVQGKIADF DITYAGAYLD RHIDAVSDYT DYAVTYDNLY AGGFSGYFTD
NAGNYIDPSQ HIAGRDHFTK NSQELRISSP SDKRFRVLAG LFYQRQTHDI LQDYQIFGLA
DATSVNGRPG TIWLTKQFRV DKDYAAFGEA SFDIVPDKLT LTGGLRAFKY NNSLVGFFGF
GDGYSSRTGV AACFTDANGN YVGTLLPGAP CNNLGVVSGN NVLPKRVKGN GTTHRLNLTW
KPTDDLMVYA TWSRGFRPGG INRRGTIPPY SPDYLTNYEL GWKTTWLDGK LRINGALFWE
EWKKFQFSFL GANSFTEIHN GPNARSKGIE LDFTFRPIEG LTLIGSGAYT DAKTRQNLCG
IDDPTYSCAG AGNFISAPKG TRLPITSKWR YGGTARYDFD MGGKYQPYVQ GTMTYASSAS
SDIRTLIFDP NGNPVNPAAL TGKLRSYAIF DFSAGAKFGR WTWEAYVENA FDKRAQKTRL
VTCGQCFDRP YVFPNTPQTI GMRIGWKY
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