| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0506 |
|---|
| Symbol | |
|---|
| ID | 5199741 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | + |
|---|
| Start bp | 546850 |
|---|
| End bp | 547695 |
|---|
| Gene Length | 846 bp |
|---|
| Protein Length | 281 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 640580047 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_001261012 |
|---|
| Protein GI | 148553430 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGGCGG CCGTCGTCAC GGGGGCGTCG AGCGGCATCG GCCGCGCGAC GGCCGCCCTG
TTGGTAGAAC GCGGGTGGCG CGTGTTCGGA TCGGTCCGGA CCGAAGCGCA GGCGGAGGAA
CTGTCCGTCG CGCTCGGCCC GGCCCTCGTC CCGCTCCGCT TCGACCTGCG CGACGGCCCG
GCGATCGCGC GGGCGGCCAA ACAGGTCGCG GCGGCGCTGG AGGGGAGCCG CCTGGCGGGA
CTCGTCAACA ATGCCGGGCT CGCCCATTTC GGGCCGCTCG CGGTGCAGCC GATCGCTGAT
TGGCAGGCGC AGGTCGACGT CAACCTGACC GGCACGCTGC GCGTCGTCCA GGCCTTCCTG
CCGCTGCTCG GCGCCGATCG CGCGCGCAGC GGACCGCCGG GGCGGATCGT CAATATCTCT
TCGGTCAGCG GGCGGATCAC CCTGCCCTTC ACCAGCGGCT ATGCCGCGTC GAAACATGGG
CTGGAGGCGC TATCCGACGC GATGCGGCGC GAGCTGGCGA TCTACGGCAT CCGGACGATC
GTCATTCAGC CCGGCGCGGT GCGGACGCCG ATCTGGGACA AGGTCGACCG CCCCGAGGAC
GAACGCTTCG CGGACGGCGA TTTCGGGCCG CCGTTCGCGC GGTTCAAGAT CGCCTTCGCG
GCGGCGGGCG AGGCGGCGCT CCCGCCCGAG CGCTTCGCGG CGCTGATCCA CCGCGTCCTC
ACCATCCGCC ATCCGCGCCC GCGCTATGCA CTGATGCGCG GGCGGCTGGC CCATTGGACA
CTGCCGCGCC TGCTGCCCGA CCGGATGCTC GACCGCATCC TGGCCGGCCA ACTTGGCCCC
TCATGA
|
|---|
| Protein sequence | MRAAVVTGAS SGIGRATAAL LVERGWRVFG SVRTEAQAEE LSVALGPALV PLRFDLRDGP
AIARAAKQVA AALEGSRLAG LVNNAGLAHF GPLAVQPIAD WQAQVDVNLT GTLRVVQAFL
PLLGADRARS GPPGRIVNIS SVSGRITLPF TSGYAASKHG LEALSDAMRR ELAIYGIRTI
VIQPGAVRTP IWDKVDRPED ERFADGDFGP PFARFKIAFA AAGEAALPPE RFAALIHRVL
TIRHPRPRYA LMRGRLAHWT LPRLLPDRML DRILAGQLGP S
|
|---|
| |