| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0505 |
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| Symbol | |
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| ID | 5199740 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 544704 |
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| End bp | 546845 |
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| Gene Length | 2142 bp |
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| Protein Length | 713 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640580046 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001261011 |
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| Protein GI | 148553429 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.742507 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGGGA AACTCAGGAT CGGCCGATGG GCCATTGGAA CTGCAATATT TTCGATCGCA
ACCATGGCCA TGGCGCAGCG GCCCGAAACG GCCGGGCCAG CGATCGGGGC GGAGGAGGCG
CCTGACCAGA TCGTCGTCAC TGGCCGCAAG CGCGAGGAAC GGCTGCAGGA CGTGCCCGAG
GCGATCACCG CCTTCACCTC GGCGTCGATC GAGGCGGCGG CGATCGACAA TATCCGCGAC
GTGGCGCTCA ACGTGCCCAA TTTCAGCATC TCGTCGGCCG AGCAGCCGGG CATCGTGCTG
ATCAACATCC GCGGCGTCGG CCAGGTCCGC AACGGCGAGC CGCCGATCGC GGTGGTGATC
GACGGCGTCC AGCTCAACAA CGTCAACCAG TTCACCCAGG ACCTGTTCGA CATCGAACGG
ATCGAGGTGC TGAAGGGACC GCAGGGCGCG GTCTACGGCC GCAACGCGAT CGCCGGCGCG
CTCAACATCG TCACCCGCCA GCCCACCAAC GAACTGGAAG GCATGGTCGA GGGCACGATC
GGCACCGGCA GCGACCTGCG CGCGCGCGCC GCGATCAGCG GGCCGATCGT CGAGGACAAG
CTGCTGTTCC GGCTGTCCGG CGCGGTGCGC GATTTCGACG GCGACATCAG GAACGTGACC
GTCGGCAAGG ACATCAACAA CGACAAGTCC TACAGCTTCC GCGGCAGCCT GATCGCCCAT
CCCAGCGAGG CGCTGACGAT CGACATCCGC GGCTCGCGGA CCGAGAACCA CAGCGGCGCG
GCCTGGTATT CCTTCGTGCC GCCGGGCGCG CGGCGGACCG ACCTGCTGCC GATCACCGCC
GACATCCCCG GCAAGGTCGA CCGCTATCTC CACGATGCGT CGGTCAAGAT CGACTATGAA
TTCCCGGGCG CCACGCTGAC CTCGGTCAGT GCCTATACCC GGACCAAATT CTTCCTGAAC
GAGGATTTCG ACTTCCTACC GTTCGACTAT CTGTCGGGCA CGCAGGGGTT CAAGTCCGAC
GCCTGGAGCC AGGAACTGCG GCTGACGTCG GACCCCGGCC GGTTCAACTG GATGGCCGGC
GCCTATCTGA TCAAGACCGA CCAGAAGCTC GACAGCGTGC TGTACGTGCG GCCGGGGGCC
GGCGGAGTGC TGTTCCCCTT CCCGATCTCG GCGCCGACCG TCTTCACCGC CACCCGGTCG
ACCGACGACA ATTTCGCCTA CGCCTTCTTC GGGCAGGCCA ATTATAGCGC GACCGACGCG
CTCGATCTGT CGCTGGGGCT GCGCTACGAC ATCGACGAGC GCAAGCAGAC CGACCGGGCG
CTGCCCGGCC TGCCGCGCTA CGACAAGACG TTCAAGGCGT TCCAGCCCAA GCTCGCCATC
ACCTACAAGC TGACGCCCGA CGCCAATCTC TACGCCTCGG CGGGCAAGGG CTTCCGCAGC
GGCGGCTTCA ACCCCAACGC CCGCATCACA CGCGTCTACA AGGCCGAGGA GAATTGGAGC
TTCGAGACCG GCTTCAAGTC GACCTGGCTC GATCGCAAGC TGACCCTCAA CGGCGCGCTG
TTCTACACCC GCGTCAAGGA TCGGCAGATC TACCTGTTCG ACCAGCTCAC CGGATCGCAG
ATCATCACCA ACCCGATCCC GCGCTCGCGC ATCTTCGGCG CCGAACTGGA GATGACGGCG
CGGCCGGCGG ACGGCCTCGA CATCTCGCTG TCGGGCGGTT TCCTCGACAC CAAGGTCACC
CGCTACGACA CGACGGTGTT CGCCGGGCTG CCCGCGGCCG GCGACTTCAC CGGCAACGAC
CTGCCGCAGG TGCCGCGCTG GTCCTATTCG GCGGCGGTGC AGTACCGCAT CCCGCTCGGC
GCCGACACCG ATCTCACCCC GCGCATCGAG GCGAACGGCA AGGGCGGCCA TTATTATTGG
GAGGTCGACA ATCGCGACCG GCTGAACTTC GTCAACCTGG TCAATGCCCG GCTGTCGCTG
CGCACCGGCC CGGTGACGCT GACCGCCTAT GTCGAGAACC TGTTCGACAA GGAATATCTG
ATCGACGTCG TCGCGCAGCG TTTCAGCGGT GCTCCGCTCG GCGATTACAA CCAGAGGAGC
TGGGGGCGGC GCTACGGCCT GACCGGCCGG TTCAACTTCT AG
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| Protein sequence | MTGKLRIGRW AIGTAIFSIA TMAMAQRPET AGPAIGAEEA PDQIVVTGRK REERLQDVPE
AITAFTSASI EAAAIDNIRD VALNVPNFSI SSAEQPGIVL INIRGVGQVR NGEPPIAVVI
DGVQLNNVNQ FTQDLFDIER IEVLKGPQGA VYGRNAIAGA LNIVTRQPTN ELEGMVEGTI
GTGSDLRARA AISGPIVEDK LLFRLSGAVR DFDGDIRNVT VGKDINNDKS YSFRGSLIAH
PSEALTIDIR GSRTENHSGA AWYSFVPPGA RRTDLLPITA DIPGKVDRYL HDASVKIDYE
FPGATLTSVS AYTRTKFFLN EDFDFLPFDY LSGTQGFKSD AWSQELRLTS DPGRFNWMAG
AYLIKTDQKL DSVLYVRPGA GGVLFPFPIS APTVFTATRS TDDNFAYAFF GQANYSATDA
LDLSLGLRYD IDERKQTDRA LPGLPRYDKT FKAFQPKLAI TYKLTPDANL YASAGKGFRS
GGFNPNARIT RVYKAEENWS FETGFKSTWL DRKLTLNGAL FYTRVKDRQI YLFDQLTGSQ
IITNPIPRSR IFGAELEMTA RPADGLDISL SGGFLDTKVT RYDTTVFAGL PAAGDFTGND
LPQVPRWSYS AAVQYRIPLG ADTDLTPRIE ANGKGGHYYW EVDNRDRLNF VNLVNARLSL
RTGPVTLTAY VENLFDKEYL IDVVAQRFSG APLGDYNQRS WGRRYGLTGR FNF
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