Gene Swit_0492 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_0492 
Symbol 
ID5198985 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp528559 
End bp529599 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content69% 
IMG OID640580032 
Productrod shape-determining protein MreB 
Protein accessionYP_001260998 
Protein GI148553416 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG1077] Actin-like ATPase involved in cell morphogenesis 
TIGRFAM ID[TIGR00904] cell shape determining protein, MreB/Mrl family 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.152747 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.695392 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCCTGC AGCGTTACTT CAAGTTCATG TCGCACGATA TGGCGATCGA TCTCGGCACC 
GCGAACACCG TCGTCTATGT GCGCGGGCGC GGGATCGTGC TCAACGAGCC GTCGGTCGTG
GCGATCGAGA CGACCAACGG GGTGAAGCGG GTGCGCGCCG TCGGTGACGA CGCAAAGCTG
ATGATGGGCA AGACGCCGGG CTCGATCGAC GCGATCCGCC CGCTGCGCGA CGGCGTGATC
GCCGACATCG ACGTGGCCGA GCAGATGATC AAGCACTTCA TCCAGAAGGT GCATGGCCGC
CGCAACTTCA TGCGCTGGCC GGAAATCGTG ATCTGCGTGC CGTCGGGGTC GACCTCGGTC
GAGCGCCGCG CGATCCGCGA CGCCGCCTCC AACGCGGGCG CCAGCCAGGT GTGGCTGATC
GAGGAACCGA TGGCGGCCGC GATCGGCGCG GGGATGCCGG TGACCGAGCC GATCGGGTCG
ATGGTCGTGG ACATCGGCGG CGGCACCACG GAGGTCGCCG TGCTCTCGCT GCGCGGCCTC
GCCTACACCA CCTCGGTCCG CGTCGGCGGC GACAAGATGG ACGAGGCGAT CAGCTCCTAT
GTCCGCCGCA ACCACAACCT GCTGATCGGC GAAGCCACCG CCGAGCGGAT CAAGCAGGAG
GTCGGCGTCG CCAAGATGCC GGCCGACGGC AAGGGCGAGA CGATCCACAT CAAGGGCCGC
GACCTCGTCA ACGGCGTGCC GAAGGAGATC ACGATCACCC AGGCGCAGAT CGCCGAGGCG
CTGACCGAGC CGGTCTCGGC GATCGTCGAG GGCGTCCGCA TCGCGCTGGA GAACACCGCG
CCGGAGCTGG CCGCCGACAT CGTCGACCAG GGCATCGTCC TGACCGGCGG CGGCGCGCTG
CTGCAGGGCA TCGACGAGGT GTTGCGCGAG GCGACCGGCC TGCCGGTCTC GATCGCCGAC
GACCCGCTGA CCTGCGTCGC CCTGGGCACC GGACGCGCGC TGGAGGACTC GGTCTTCCGC
GGCGTGCTCC AGACGGCCTG A
 
Protein sequence
MFLQRYFKFM SHDMAIDLGT ANTVVYVRGR GIVLNEPSVV AIETTNGVKR VRAVGDDAKL 
MMGKTPGSID AIRPLRDGVI ADIDVAEQMI KHFIQKVHGR RNFMRWPEIV ICVPSGSTSV
ERRAIRDAAS NAGASQVWLI EEPMAAAIGA GMPVTEPIGS MVVDIGGGTT EVAVLSLRGL
AYTTSVRVGG DKMDEAISSY VRRNHNLLIG EATAERIKQE VGVAKMPADG KGETIHIKGR
DLVNGVPKEI TITQAQIAEA LTEPVSAIVE GVRIALENTA PELAADIVDQ GIVLTGGGAL
LQGIDEVLRE ATGLPVSIAD DPLTCVALGT GRALEDSVFR GVLQTA