| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0474 |
|---|
| Symbol | |
|---|
| ID | 5196575 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | - |
|---|
| Start bp | 505334 |
|---|
| End bp | 506269 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640580013 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001260980 |
|---|
| Protein GI | 148553398 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACACAC GATTCCTCGA AACCTTCATC TGGCTGGCAC GGCTGAAGAG CTTCAGCCGC
ACGGCCGAGA AACTGCACGC GAGCCAGCCC GCCGTCTCGG GCCGGATCGT CGCGCTCGAG
GAACTGCTGG GGGTGACGCT CTACGAGCGC AATTCGAAGG GTTTCGAGCT GACCGCCGCC
GGCCGCCGCG TGCTCGACCG TTGCGAACGG ATCGTCGAGC TGTCGAACGA GCTGAAGTCG
ATCGCGACCG AGGACAATGT GCTGGGCCGC CCGGTGCGGA TCGGCGCGTC GGACGTGATC
ACGCTGAGCT GGATGAGCGA CCTCGTCGCC GTGCTCGGCA GCAAATATGT CGATTATCAG
TTCGATATCG TCACCGACAG CGCCAACAAT CTCAGCCGGA TGCTGATGGC CGACGAGATC
GACATCGCGC TGATCGCCAA CGGCATCGAC GCCAACCGGA TCGTCAACGC GCCGCTGTGC
AACTATCGCA TCGAATGGCT CGCCAATCCG CGCCGCTTCG ACGTCACCAA GCCGATCAAC
ATCGAACAGC TCTGCGAACT GCCGATCATC ATGCCGCCGC CCGGGACCCC CGGCTACACC
TGGCAGGTCG AATATCTCAA GCGGCACAAT CCCAACTATT CGCCCGACCG GCCGTCGCCG
CTGCGCATCT CCTGCGGCTA TTCGCCGGCG ACCGGCATCC AGATGGTGGC GCAGGGCTTC
GGCGTGCTGC CGGTGCCGGT GCTGCTCGCG CGGCCCTGGA TCGCCTCGGG CGAAGTCGCC
CCGCTCAAGG TCAAGGAGAG CTTCCCGGCC TGGGCGATGA ACGCCTGCTA CAAGTCGCCG
CCGACCATCC CGATCATCGT CAGCCTCGTC GAAACCGCGC AGGCGGTCGC CAAGGCCTAT
GCCGACCGAC GGGGCGGATC GGATTTCTGG CCCTGA
|
|---|
| Protein sequence | MNTRFLETFI WLARLKSFSR TAEKLHASQP AVSGRIVALE ELLGVTLYER NSKGFELTAA
GRRVLDRCER IVELSNELKS IATEDNVLGR PVRIGASDVI TLSWMSDLVA VLGSKYVDYQ
FDIVTDSANN LSRMLMADEI DIALIANGID ANRIVNAPLC NYRIEWLANP RRFDVTKPIN
IEQLCELPII MPPPGTPGYT WQVEYLKRHN PNYSPDRPSP LRISCGYSPA TGIQMVAQGF
GVLPVPVLLA RPWIASGEVA PLKVKESFPA WAMNACYKSP PTIPIIVSLV ETAQAVAKAY
ADRRGGSDFW P
|
|---|
| |