Gene Swit_0456 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_0456 
Symbol 
ID5196512 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp487969 
End bp489171 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content72% 
IMG OID640579995 
Producthypothetical protein 
Protein accessionYP_001260962 
Protein GI148553380 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism 
COG ID[COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.558276 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAAGCA GGCTGGTCGT CGCGGGCGGC GGCCCCGCCG GGATGATGGC CGGCCTGTTG 
TTCGCGCGGG CGGGCGTGGA GACGCTGGTC GTCGAGAAGC ATGGCGATTT CCTGCGCGAT
TTCCGCGGGG ACACCGTCCA TCCCTCGACG ATCGAGCTGT TCGACGAGCT CGGCCTCGCC
GAGGCGCTGC TGGCGCGCGA GCATGACATG GTCACCGACG TCTCGGCGTC GGTCGGCGGG
CGGCGCTATC GGGTGGCCGA CCTCACCCAT CTGCCGGTTC GCCACAAATT CATGATGATG
ATGCCGCAAT GGCATTTCCT CGATTTCGTG CGCGACGCGG CGAGCCGCTG GCCGGCCTTC
GCGCTGCGCA TGGAGAGCGA GGTGGTCGGG CTGACCGAGA CGGGCGGGCG AGTGGACGGC
GTGCGCCTCG CCGACGGCGA GACGATCCCG GCCGACCTGG TGATCGCCGC CGACGGACGC
GGCTCGATCC TGCGCGAGGC GGCGGGGCTT CCCCGCGAGG ACCTCGGCGC GCCGATCGAC
GTCTTCTGGT TCCGGGTGCC CAAGCCGCGC ACCGCGCACA ACGAGACGAT GGGCCGCTTC
GCGCCGGGCA CGGTGATCGC GATGATCGAC CGGGGCGACT ATTGGCAATG CGCCTTCGTC
TTCGCCAAGG GCGGCGCCGA CCGCATCCGC GCCGAGGGGC TCGACGCCTT CCGGACGCGG
GTGGCGCTCG CGGAGCCCGA GATCGCGGGG AGCCTCGAGG CGATCGCCTC CTGGGACGAC
GTCAAGCTGC TGTCGGTCTC GCTCGACCGG CTGACCCGCT GGCACCGGCC CGGCCTGCTG
GCGATCGGCG ACGCCGCCCA TGCCATGTCG CCGGTCGGCG GGGTGGGGAT CAACCTGGCG
ATCCAGGATG CGGTGGCGGC GGCGAACATC CTCGCCGGGC CGATGGCGCG GGGCGCGCCG
GTCGACGGCC TGCTCGGCAA GGTCCAGGCG CGGCGGATGC TGCCCGTCCG GGTGATCCAG
GGCTTGCAGC GCGCGGTCCA TGCCGGCGTA CTCGGCCCGA CGCTCGATGC GACCGCGCAA
ATGGAGGCGC CGTTCGCGCT GCGGCTGATC GGCCGCTGTC CGCTGCTCCA GCGGATACCG
GCGCGGATCG TCGGGCTGGG CGTCCGGCGC GAGCATGTCC GGTCGCCGGC GGTTAATGTA
TAG
 
Protein sequence
MGSRLVVAGG GPAGMMAGLL FARAGVETLV VEKHGDFLRD FRGDTVHPST IELFDELGLA 
EALLAREHDM VTDVSASVGG RRYRVADLTH LPVRHKFMMM MPQWHFLDFV RDAASRWPAF
ALRMESEVVG LTETGGRVDG VRLADGETIP ADLVIAADGR GSILREAAGL PREDLGAPID
VFWFRVPKPR TAHNETMGRF APGTVIAMID RGDYWQCAFV FAKGGADRIR AEGLDAFRTR
VALAEPEIAG SLEAIASWDD VKLLSVSLDR LTRWHRPGLL AIGDAAHAMS PVGGVGINLA
IQDAVAAANI LAGPMARGAP VDGLLGKVQA RRMLPVRVIQ GLQRAVHAGV LGPTLDATAQ
MEAPFALRLI GRCPLLQRIP ARIVGLGVRR EHVRSPAVNV