| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0452 |
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| Symbol | |
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| ID | 5196831 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 481546 |
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| End bp | 482673 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640579991 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_001260958 |
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| Protein GI | 148553376 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGACC GCGATCCCGC CACCGAAGCC ACCTCCAGCA CCACCGACGT CGCCGACACG
CTCCAGTCGC CGCCGAGCGG ATGGGCGCCG CCGCCGCGCA GCCGCAGCGT GACGATCGCG
ATCGTCGCGA TCGCCGTCGT CGCGATCCTC GCCATCCTCT ATGCGTGGCA GCTGCCGCCC
TTCGCCGGCT TCTCCGAACG GACCGACAAT GCCTATGTGC GCGGCCGGGT GACGATCATC
AGCCCGCAGG TCAGCGGCTA TGTGACCAGC GTGCCCGTCC AGGACTTCGC CGAGGTGAAG
GCGGGACAGG TCCTCGCGAC GATCGACGAC CGCATCTATC GCGCGCGGGT GGCGCAGGCG
GAGGCCAATG TCGCGGCGCA GGAGGCCTCG CTCGCCAATT CGACCCAGGC GCAGCGATCG
CGCGAGGTGG CGACCGCCAG CCAGGACGCC GCGATCGTCA ATGCCCGCGC CCAGCTCGTC
CGGGCCGAGG CCGACATGCG CCGCGCCGAC GCGCTGATCG CCGACGGATC GATCTCGGCG
CGCGAGCGCG ACCAGACCCG CGCGGCCCTG CTCGCCGCGC AGGCCGGCGT CCGCCAGGCC
GAGGCCGCCC GTGCGATCGG CACCCAGGAC GTCCGCACCG TGCTGGTCGG GCGCGGCGGA
CTGACCGCGG CGGTCGAGGG CGCCCGCGCC CAGCTCCGCC TCGCCCGGAT CGACCTCGAC
AACACGGTGA TCCGCGCGCC GGTCGCCGGG CAGCTCTCCG AGATCGGCGT GCGCAACGGC
GCGTTCGTCA CGGCCGGCAC CCAGCTGATG TTCCTGGTGC CGCACGACGC CTGGGTGGTC
GCCAATTTCA AGGAGGCGCA GACCCGGGAC ATGCGGGTCG GCCAGAGCGC GAGCTTCAAG
GTCGACGCGC TGGGCGGGGC CAAGCTGACC GGCCATGTCG AGAATATCGC GCCCGCCGCC
GGCTCCGAGT TCGCCGTGCT GAAGGCCGAC AACGCCACCG GCAATTTCGT CAAGGTGGCG
CAGCGCATCT CGGTCCGCAT CCGCATCGAC CCCGGACAGG AGCTCGCCCG CCGCCTGCGC
CCGGGCATGT CGGTCGAGGC GAAGATCCAC ACGAGCGGGT CGCTCTGA
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| Protein sequence | MSDRDPATEA TSSTTDVADT LQSPPSGWAP PPRSRSVTIA IVAIAVVAIL AILYAWQLPP
FAGFSERTDN AYVRGRVTII SPQVSGYVTS VPVQDFAEVK AGQVLATIDD RIYRARVAQA
EANVAAQEAS LANSTQAQRS REVATASQDA AIVNARAQLV RAEADMRRAD ALIADGSISA
RERDQTRAAL LAAQAGVRQA EAARAIGTQD VRTVLVGRGG LTAAVEGARA QLRLARIDLD
NTVIRAPVAG QLSEIGVRNG AFVTAGTQLM FLVPHDAWVV ANFKEAQTRD MRVGQSASFK
VDALGGAKLT GHVENIAPAA GSEFAVLKAD NATGNFVKVA QRISVRIRID PGQELARRLR
PGMSVEAKIH TSGSL
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