| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0448 |
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| Symbol | |
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| ID | 5196827 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 474138 |
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| End bp | 475805 |
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| Gene Length | 1668 bp |
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| Protein Length | 555 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640579987 |
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| Product | protein of unknown function DUF894, DitE |
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| Protein accession | YP_001260954 |
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| Protein GI | 148553372 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGATG GCGGCGGGGA AGCGGCAGGG CGGGTAGGGC CTTTCGATCC GCTGCGCCAT
GGCCTGTTCC GTCGCATCTG GACGGCCAGC CTCTTCTCCA ATTTCGGCCA GCTCATCCAG
GGCGTCGGCG CGGCCTGGGC GATGACCCAG CTCACCGGGC GCGCCGACAT GGTCGCGCTG
GTCCAGTCGG CGACCTTCGC GCCGCTGATG CTGCTGTCGC TGTTCGCGGG CGCGATCGCC
GACAGCTACG ACCGGCGCAA GATCGCCCTG GTCGCGCTGT CGATCGCCTT GCTGGGCGCG
CTCGGCCTCA GCCTCGTCAC CGCGCTGGGC CTGCTGACGC CGGGCTGGAT CCTGTTCTTC
TGCTTCGTCG TCGGCACCGG CACGGCGCTG TTCGGCCCCG CCTGGCAGAG TTCGGTGGGC
GAACAGGTGC CGTCGCGCGA GCTGGCGCAG GCGATCGCGC TCAACTCGAT CAGCTACAAT
ATCGCGCGCA GCTTCGGCCC GGCGATCGGC GGCCTGCTCG TCGCGCTGGC CGGCGTGCTC
GCGGCCTTCG CCTTCAACGC GCTCGCCTAT GTCCCGTTGA TCGTCGTCAT GATCTTCTGG
CGCCGCCTGC CCGAAACCTC GCGCCTGCCG CCCGAGGCGC TGGGTCGCGC GGTGATCTCG
GGCGCGCGCT ACGTCGTCTA TTCGCCGCCG ATCCGCGCGG TGCTGGTGCG GACCCTGCTG
ATCGCCTTCG CCGGCGTGGC GGCATCGGCG CTGATGCCGC TGGTCGCGCG CGAACTGCTC
CACGGCGACG CCACCCTCTA CGGCGTGCTG CTCGGCTGCT TCGGTGGCGG CGCGGTGCTC
GGGGCGCTGT TCCTGACGCC GATCAAGGAA CGGCTGTCGG ACGAGGTTTC GGTCGGGCTC
GCCAGCGCGC TGATGGGGCT GTGCATGATC GGCACAGGCC TCAGCCGTCA CGGCGTGCTG
ACCGGCCTGC TGGTGATGGG CGCGGGATCG GGGTGGATGA TCTCGATGGC GCTGTGCAAC
ATCAACATCC AGATGTCGTC GCCGCGCTGG GTGACGGGCC GGGCGCTGGC GGCCTGCGTG
ACGGCGGTCT GCGGCGGGAT GACGATCGGC GGTTGGGCCT GGGGCCGGAT CGCCGCGTCG
GAGGGCACCG GCCTCGCGCT CGTCGCCTCG GGCACCGCGC TGATCCTGAC GATCGCGGCC
AGCCTGGTCT GGCGGATGCC GGCGGTCGAG GAGCAGCGCG ACCGCGATAC GCCGCTCAGC
GAGCCGGAGA CCAATCTCGA CCTCAACGGG CGCAGCGGCC CGATCGTCGT CACCATCGAA
TATCGCGTGC CGCTCGACCA GGCGCGCGGC TTCTACACGG CGATGATGCC GGTCGAGGCG
ATCCGCCACC GCACCGGCGG CTATGGCTGG TCGATCTCGC GCGACGTCGG CGATCCCGAG
CTGTGGACCG AGCGCTATCA CACCCCGACC TGGCACGATT ATCTGCGCCA GCGCAGCCGC
CTGACCATCG CCGATCTCGA GACCTGGCAG ATCGCGATCG ACTTCCACCG CGACAAGGAC
CCGATCCGCG TCCGCCGCAA GCTGGAGCGC CCCTATGGCT CGGTCCGCTG GCGCGAGGAC
GTGCCCGACC GCGGGGTCAT CGTGCCGCTG CCGTCGCCGG GGAGCTGA
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| Protein sequence | MADGGGEAAG RVGPFDPLRH GLFRRIWTAS LFSNFGQLIQ GVGAAWAMTQ LTGRADMVAL
VQSATFAPLM LLSLFAGAIA DSYDRRKIAL VALSIALLGA LGLSLVTALG LLTPGWILFF
CFVVGTGTAL FGPAWQSSVG EQVPSRELAQ AIALNSISYN IARSFGPAIG GLLVALAGVL
AAFAFNALAY VPLIVVMIFW RRLPETSRLP PEALGRAVIS GARYVVYSPP IRAVLVRTLL
IAFAGVAASA LMPLVARELL HGDATLYGVL LGCFGGGAVL GALFLTPIKE RLSDEVSVGL
ASALMGLCMI GTGLSRHGVL TGLLVMGAGS GWMISMALCN INIQMSSPRW VTGRALAACV
TAVCGGMTIG GWAWGRIAAS EGTGLALVAS GTALILTIAA SLVWRMPAVE EQRDRDTPLS
EPETNLDLNG RSGPIVVTIE YRVPLDQARG FYTAMMPVEA IRHRTGGYGW SISRDVGDPE
LWTERYHTPT WHDYLRQRSR LTIADLETWQ IAIDFHRDKD PIRVRRKLER PYGSVRWRED
VPDRGVIVPL PSPGS
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