| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0428 |
|---|
| Symbol | |
|---|
| ID | 5198950 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | - |
|---|
| Start bp | 454086 |
|---|
| End bp | 454913 |
|---|
| Gene Length | 828 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640579967 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001260934 |
|---|
| Protein GI | 148553352 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.114407 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.803902 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCGCT TTTCCACCCG CCTGCTCGCC GCAGCCGCGA TCCTCGCCCT TCCCGCCGCC
GCCTCGGCGC ACCGCCAGTG GATGGTGCCG AACGCGACGG TGTTCTCGGG CACCAACAGC
TGGGTGACGG TCGACGCCGC CGCCTCGAAC GACCTGTTCT TCGCCGATCA TCAGCCGATG
CGGCTCGACG GCGTGAAGGT CTGGGCGCCC GACGGCAGCG AGGGCGCGAT CGCCAATGGA
TCGACCGGCC GCTACCGCTC GACCTTCGAC GTCAAGCTCG ACAAGCCGGG CACCTGGAAG
ATCGGTACCT TCACCTCGGC GGTGATGGGC AGCTTCAAGG CCAATGGCGA GGAGCGCCGG
ATCGGTGGGC GTCCGGGCGG CGGAACGCCG CCGCTGTCGG TCGCCGACAT CCCGGCCGAC
GCCACCGACG TCAAGCTGAC CGAGGTGATC GGCCGCAACG AGCTCTACAT CACCGCCGAC
GCGCCGAGCA GCACCGTGTT CACGCCGACC GGCAAGGGCA TCGAATTCCA GCCGGTGACG
CACCCCGACG AGCTGGTCGT GGGCGAGCCC GCCAGCTTCC GCTTCCTCGT CGACGGCAAG
CCCGCCGGCG GGCTGAAGGT GACGGTGGTC CCCGGCGGCA AGCGCTACCG CAACGACGAT
GGCGCGCGCG ATTTCACGAC CGGGGCCGAC GGTGTTGCGA AGATCGATTG GCCGACGCCG
GGCATGTACT GGATCAACGC CTCGCTGACC GACGACAAGC CGTCGGCGCC GCGCGCGACC
CAGCGCCGGA TGAACTATGT GACGACCGTC GAGGTGCTGC TCCCCTGA
|
|---|
| Protein sequence | MKRFSTRLLA AAAILALPAA ASAHRQWMVP NATVFSGTNS WVTVDAAASN DLFFADHQPM
RLDGVKVWAP DGSEGAIANG STGRYRSTFD VKLDKPGTWK IGTFTSAVMG SFKANGEERR
IGGRPGGGTP PLSVADIPAD ATDVKLTEVI GRNELYITAD APSSTVFTPT GKGIEFQPVT
HPDELVVGEP ASFRFLVDGK PAGGLKVTVV PGGKRYRNDD GARDFTTGAD GVAKIDWPTP
GMYWINASLT DDKPSAPRAT QRRMNYVTTV EVLLP
|
|---|
| |