| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0421 |
|---|
| Symbol | |
|---|
| ID | 5199691 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | - |
|---|
| Start bp | 449551 |
|---|
| End bp | 450474 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640579959 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001260927 |
|---|
| Protein GI | 148553345 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.0852128 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.784215 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAATCAT TCGTGACGTT GCGGCCCCAG TTCCGCCAAA AAAAAGCACT TGCCCCGAAC
AGGGCCGCCA CACATTCTGG TTGGACAGTC GTAACGAATT GCGAGGGGAT GCCCGTGACG
ATCCGCCATC TGAGCATCAT CGCCGCCTGC GGGCCGCTCC TGCTGCCCTC CATCGCGTCA
GCGCAGGCGC CGCGCGACCT GGGCGACCTC GTCGGTGCCC GCGCGGCCGG CGGCGAGACG
CAGCTCGAAG AACGGGGCTA TGTCCATATC AAGACCCAGA AGGGCGACGA TCGGGCGTGG
AGCTACTGGT GGCAGCCGAA GCACCGTGCC TGCGTGTCGG TGGCCGTTTT CGACGGGCGG
TTCGATGCCA TCACGACGAC GCCGGCGGCC GATTGCAACC AGGGCAACGC CAAGGCGGAC
GGGAAAGGCG GCTCCGGCGC GGCGGCGGCA GCGGCCATCG GCGTTGCCCT CGTCGGGGTG
GCGGCGCTCG CGCACAACTC GCACAACCAC GACAATGGGA AGCATCTCGA CGACGAGGCC
GCGGATTCGC AGTTCGAGCG CGGCTATCGC GACGGTCTCT ATGCGCAATC CTACCATAAT
TACGATCGGG CCGATGCCTA TTCGGACGGC TATTCCAAGG GCGTCGCCCA GCGCGGCAAC
GAAACCCGGC ATCGCGACGG CCATGCCGAC GATGCCGGCG GCTATCGCGC CTCGGTCAAC
GTCAACGACC TCGTCACCCA GCGGGCGGCG AGCGCAGACG TCGAGCTCCA GAAGCGCGGC
TTCCGGACCG TGAACGCCTA TCAAGCCGGC GATTCCGCCT ATACGATCCG GTCGAACGAG
CGAACCGGCC AGTGCGTGCA GGTCGCCGTC AAGGACGGGC GCATCCGCTA CATCGCCGCG
ATCAAGCCAT CGGCCTGCCG CTGA
|
|---|
| Protein sequence | MQSFVTLRPQ FRQKKALAPN RAATHSGWTV VTNCEGMPVT IRHLSIIAAC GPLLLPSIAS
AQAPRDLGDL VGARAAGGET QLEERGYVHI KTQKGDDRAW SYWWQPKHRA CVSVAVFDGR
FDAITTTPAA DCNQGNAKAD GKGGSGAAAA AAIGVALVGV AALAHNSHNH DNGKHLDDEA
ADSQFERGYR DGLYAQSYHN YDRADAYSDG YSKGVAQRGN ETRHRDGHAD DAGGYRASVN
VNDLVTQRAA SADVELQKRG FRTVNAYQAG DSAYTIRSNE RTGQCVQVAV KDGRIRYIAA
IKPSACR
|
|---|
| |