| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0412 |
|---|
| Symbol | |
|---|
| ID | 5198605 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | + |
|---|
| Start bp | 439764 |
|---|
| End bp | 441233 |
|---|
| Gene Length | 1470 bp |
|---|
| Protein Length | 489 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640579950 |
|---|
| Product | leucyl aminopeptidase |
|---|
| Protein accession | YP_001260918 |
|---|
| Protein GI | 148553336 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0260] Leucyl aminopeptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0249677 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCATCA GCTTTGTCGA CAGCCGGCCG GCCCGGCCCC ACGCCCTTGC GATCGCGGTC
GCGCCGGCCA TGATCGGCGG CGCCGGCCTT GCCGCGCTGC CCGACGCGGC CCAGGCGCTG
GCGCGCATCG CCGCCCAGGC CAACCGGTTC GATGGCGAGA GCGGTGCCGT GGTCGAATTC
TTCGGCGAGA CCGATGCGGC CAACCGGCGC CTGCTGCTCG CCGGCGTCGG ATCGAAGAAT
GATTTCGAGC GGGCCGGCGC CGCGCTGGTG GCCAAGCTGC TGACCTCGGG CGAGACCGCG
CTGGTCGTCG ACATCTCGGC GGTCGCGGGC GACAAGCCGG CCGATGCGGC GGCCGCGCTC
GCCTTCGGCG CGGTGCTGCG CGCATGGCGG CACGACGCCT ATCGCACCAG GCTGGACGCC
AAGCAGCGCC CGTCGCTGGA GGAGATCGTC ATCGTCGGCG GCGGCGCCGG CGCGGCGGAG
GCCTGGAAGG ACCGTGAGGC GGTCGCCGAG GGCGTGATGT TCACCCGCGA GCTGGTCGCC
GAGCCCGCCA ATATCGTCTA TCCGGAAAGC TTCGTCGAAC GCTGCCGCCC GCTCGCCGAC
CTCGGCGTGA AGATCGAGGT GCTCGATCGC GATGCGATGG CCAAGCTCGG CATGGGCGCG
CTGCTCGGCG TCGCGCAGGG ATCGGTGCGC GAGCCCCGGC TGCTGGTCAT GACCTGGGAC
GGCACCGGCG GCGCGGAGCC GCCGATCGCC CTGGTCGGCA AGGGCGTGAC CTTCGACACC
GGCGGCATCT CGCTCAAGCC GCCGGCCGGC ATGGAGGACA TGAAGTGGGA CATGGGCGGC
GCGGGCGCCG TCGCGGGGAC GATGAAGGCG CTGGCGCTGC GCAAGGCGAA GGCGCACGTC
ATCGGCGTCT GCGGCCTGGT CGAGAACATG CCCGACGGCA ATGCCCAGCG TCCGGGCGAC
GTGGTCACCT CCATGTCGGG CCAGACGATC GAGGTGATCA ACACCGACGC CGAGGGCCGC
CTCGTCCTGT GCGACGCGTT GACCTGGGTG CAGAAGACCC GCAACCCGAA GACGATCATC
GACCTCGCCA CCCTGACCGG CGCCATGATC ATCTCGCTCG GTCATGAATA TGGCGGGATG
TTCGCCAATG ACGACGCGCT GGCCGACCAG CTTTCCGCCG CCGGCGGCGC GGTGGGCGAC
AAGCTGTGGC GGATGCCGCT CGGCGATGCC TTCGACAAGC TGATCGATTC ACCGATCGCC
GACATGAAGA ATGTCGGCCC GCGCGAGGGC GGCTCGATCA CCGCCGCGCA ATTCCTCAAG
CGCTATATCG AGGACGGGGT CCGCTGGGCG CATCTCGATA TCGCCGGCAT GGTCTGGGCC
TCGAAGCCCG GCGCGACGTG GGACAAGGGG GCGACCGGCT ATGGCGTGCG CCTGCTCGAC
CGCTTCGTCG CCGACAATTT CGAGAAATAG
|
|---|
| Protein sequence | MRISFVDSRP ARPHALAIAV APAMIGGAGL AALPDAAQAL ARIAAQANRF DGESGAVVEF
FGETDAANRR LLLAGVGSKN DFERAGAALV AKLLTSGETA LVVDISAVAG DKPADAAAAL
AFGAVLRAWR HDAYRTRLDA KQRPSLEEIV IVGGGAGAAE AWKDREAVAE GVMFTRELVA
EPANIVYPES FVERCRPLAD LGVKIEVLDR DAMAKLGMGA LLGVAQGSVR EPRLLVMTWD
GTGGAEPPIA LVGKGVTFDT GGISLKPPAG MEDMKWDMGG AGAVAGTMKA LALRKAKAHV
IGVCGLVENM PDGNAQRPGD VVTSMSGQTI EVINTDAEGR LVLCDALTWV QKTRNPKTII
DLATLTGAMI ISLGHEYGGM FANDDALADQ LSAAGGAVGD KLWRMPLGDA FDKLIDSPIA
DMKNVGPREG GSITAAQFLK RYIEDGVRWA HLDIAGMVWA SKPGATWDKG ATGYGVRLLD
RFVADNFEK
|
|---|
| |