| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0410 |
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| Symbol | |
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| ID | 5198603 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 435945 |
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| End bp | 437285 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640579948 |
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| Product | PpiC-type peptidyl-prolyl cis-trans isomerase |
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| Protein accession | YP_001260916 |
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| Protein GI | 148553334 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0760] Parvulin-like peptidyl-prolyl isomerase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.100604 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAGGC GGGGCGGCTT TTGGATGACG GCGGCGGCGG TCGGGGCGAT CGCCCTGGCG
ACGCCGATCA TCGCCCAGAC GATGATGGAC GACGAGGATG TCGGCGGCCT CAATATCCCG
AAGGACATCA CCGTCTTCGG CAACAGGGAC CCGAACATCC GCACCGCGAC GGCGATCGTC
AACGGCACGA TCATCACCCA GACCGACGTC GAGCAGAGGC TGGCGCTGGT GATCGCGGCC
AATGGCGGCA ACATCCCCGA CGAGGAGCGC GAACGCCTGC GCCTGCAGGT GCTGCGCAAC
CTGATCGACG AGACGCTGCA GATCCAGGAG GCGACCGCCC AGAAGGTCGA GGTGTCGCGC
GAGGAAGTGC AGCAGACCTA TGACCGGGTC GCCGCCAACT TCCGCAAGTC GCCCAAGGAG
TTCGCCGAGT TCCTGCACGA GAAGGGATCG TCCCAGGCGT CGATCAAGCG GCAGATCGAG
GGCGAGGCCG CCTGGCGCCG CGTGCTCAGC CGCAAGGTCG AGCCGTTCGT CGCGGTCAGC
GACGAGGAGG TCAACGCGAT CATCGCCCGC CTCAAGGCGT CGAAGGGCGC CAACGAATAT
CATGTCGGCG AGATCTTCCT GTCGGCGACG CCCGAGACGA TGAACGAAGC CAACGCCAAT
GCGGAGCGGA TCATCGATCA GGTCCGCCGT GGCGCTTCCT TCGCGGCCTA TGCGCGGCAA
TTCTCCGAAG CGTCGACCGC GGCGGTCGGC GGCGATCTCG GCTGGGTCCG GGCCGAGCAG
CTTCCCGACC AGCTTTCCGC GGTCGTCAAC CAGCTCCAGC CCGGCCAGAT CAGCCAGCCC
ATCGCCATCC CCGGCGGCTA TTCGATCCTG CTGCTGAGCG ACAAGCGCCA GGTGCTCGGC
GCCGATCCGC GCGACGCGCA GCTCCTCCTC AAGCAGCTCA CCGTCAACTT CCCGCCGGGC
ATCACCCAGG CGCAGGCAAC CCCGAAGGTC GAGGCGTTCG CCAAGGCGCT CGAACAGATC
AAGGGCTGCG GCAACGCCAA TGAGGTCGCC GCCAATATCG GCGCCGAGGT CGTCAACAAC
GACCAGATGA AGATCCGCGA CCTGCCGCCG CAGCTCCAGG AAGTGATGCT CAACCTGCAG
ATCGGTCAGT CGACCCCGCC CTTCGGGTCG ATGCGCGACG GCATCCGCGC GCTGATCCTG
TGCGGCCGCG ACGATCCGGC GCCCTCGTCG GGCCCGTCGT TCGAGCAGAT CCAGTCGCAG
ATCGAGCAGG AACGCGTCAA TCGCCGCGCC CAGCGCTATC TGCGCGACCT GCGGCGCGAC
GCCGTCATCG AATATCGATG A
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| Protein sequence | MLRRGGFWMT AAAVGAIALA TPIIAQTMMD DEDVGGLNIP KDITVFGNRD PNIRTATAIV
NGTIITQTDV EQRLALVIAA NGGNIPDEER ERLRLQVLRN LIDETLQIQE ATAQKVEVSR
EEVQQTYDRV AANFRKSPKE FAEFLHEKGS SQASIKRQIE GEAAWRRVLS RKVEPFVAVS
DEEVNAIIAR LKASKGANEY HVGEIFLSAT PETMNEANAN AERIIDQVRR GASFAAYARQ
FSEASTAAVG GDLGWVRAEQ LPDQLSAVVN QLQPGQISQP IAIPGGYSIL LLSDKRQVLG
ADPRDAQLLL KQLTVNFPPG ITQAQATPKV EAFAKALEQI KGCGNANEVA ANIGAEVVNN
DQMKIRDLPP QLQEVMLNLQ IGQSTPPFGS MRDGIRALIL CGRDDPAPSS GPSFEQIQSQ
IEQERVNRRA QRYLRDLRRD AVIEYR
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