| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0405 |
|---|
| Symbol | |
|---|
| ID | 5196946 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | + |
|---|
| Start bp | 430782 |
|---|
| End bp | 432239 |
|---|
| Gene Length | 1458 bp |
|---|
| Protein Length | 485 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640579943 |
|---|
| Product | inosine-5'-monophosphate dehydrogenase |
|---|
| Protein accession | YP_001260911 |
|---|
| Protein GI | 148553329 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0516] IMP dehydrogenase/GMP reductase
[COG0517] FOG: CBS domain |
|---|
| TIGRFAM ID | [TIGR01302] inosine-5'-monophosphate dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0548973 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACATCA GCCTCGGCCT TACTTTCGAC GACGTGCTTC TCAGGCCCGG AGAGTCGGAC
GTATTGCCGA GCCAGGCGAA CACCGCCACC CAGGTGACCA AGGCGATCAC GCTGAACATC
CCGATCCTGT CGTCGGCGAT GGACACCGTG ACCGAAGCCG ACATGGCGAT CGTCATGGCG
CAGCTCGGCG GCCTCGGCGT GCTCCACCGC AACCTGACCG TCGAGGAGCA GGCCGCCGCC
GTCCGTGCGG TCAAGCGGTT CGAATCGGGC ATGGTCGTCA ACCCGATCAC GATGCAGCCG
CACCAGACGC TGGCCGATGC GCACGAGCTG ATGGCGCGCA ACAAGATCTC GGGCATCCCG
GTGGTCGAGG CCGACGGCAA GCTCGTCGGC ATCCTCACCA ACCGCGACGT CCGCTTCGCC
GAGAACCCCA ACCAGCCGGT GTCCGAGCTG ATGACGAGCC AGAACCTGGC CGTTGTCCGC
AGCGGCGTCA GCCAGGAGGA GGCGCGCCGC ACGCTCCACC AGCGCCGGAT CGAGAAGCTG
CTGGTGGTCG ACGACGCCTA TCGCTGCGTC GGGCTGATCA CGGTCAAGGA CATGGAGAAG
GCGGTCAACT ATCCGTCCGC CACCAAGGAC CCGAGCGGCC GGCTGCGCGT CGCCGCCGCG
ACGACGGTCG GCGACAAGGG CTTTGAGCGG ACCGAGGCGC TGGTCGACGC CGAGTGCGAC
CTGATCGTCA TCGACACCGC GCACGGCCAT AATCGCGACG TCGCCCGCGC CGTCGAGCGG
GTGAAGCGGC TGTCCAACTC GGTCCAGGTC GTCGCCGGCA ACGTTGCCAC CGCCGAAGCG
GCCCGCGCGC TGATCGACGC GGGCGCGGAC GGGGTCAAGG TCGGCATCGG CCCGGGCTCG
ATCTGCACCA CCCGCATCGT CGCGGGCGTC GGCGTGCCGC AGCTCACCGC GGTGATGGAA
GCCGCCGCCG AGGCCGCCAA GTCGGGCGTG CCGGTGATCG CCGACGGCGG CCTGCGCACC
TCGGGCGATA TCGCCAAGGC GCTCGCCGCG GGCGCGAGCA CGGTGATGGT CGGATCGCTG
CTGGCGGGCA CCGAGGAAGC GCCGGGCGAG ACCTTCATCT ACCAGGGCCG CGCCTATAAG
TCCTATCGCG GCATGGGCTC GGTCGGCGCG ATGGCGCGCG GTTCGGCCGA CCGCTATTTC
CAGCAGGACA TCAAGGACCA GATGAAGCTG GTGCCCGAGG GCATCGAGGG CCAGGTCCCC
TACAAGGGCA CCGCGCGCGA CGTGATCCAC CAGCTCGTCG GCGGCGTGAA GGCGGCGATG
GGCTATACCG GCGCCCGGAC GATCCCCGAG CTGCAGAAGC GCGCCCGCTT CGTCCGCATC
ACCAATGCGG GCCTCAAGGA AAGCCATGTC CATGACGTGT CGATCACCCG CGAGGCGCCC
AATTATCCGA CGCGCTAG
|
|---|
| Protein sequence | MDISLGLTFD DVLLRPGESD VLPSQANTAT QVTKAITLNI PILSSAMDTV TEADMAIVMA
QLGGLGVLHR NLTVEEQAAA VRAVKRFESG MVVNPITMQP HQTLADAHEL MARNKISGIP
VVEADGKLVG ILTNRDVRFA ENPNQPVSEL MTSQNLAVVR SGVSQEEARR TLHQRRIEKL
LVVDDAYRCV GLITVKDMEK AVNYPSATKD PSGRLRVAAA TTVGDKGFER TEALVDAECD
LIVIDTAHGH NRDVARAVER VKRLSNSVQV VAGNVATAEA ARALIDAGAD GVKVGIGPGS
ICTTRIVAGV GVPQLTAVME AAAEAAKSGV PVIADGGLRT SGDIAKALAA GASTVMVGSL
LAGTEEAPGE TFIYQGRAYK SYRGMGSVGA MARGSADRYF QQDIKDQMKL VPEGIEGQVP
YKGTARDVIH QLVGGVKAAM GYTGARTIPE LQKRARFVRI TNAGLKESHV HDVSITREAP
NYPTR
|
|---|
| |