| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0402 |
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| Symbol | |
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| ID | 5198354 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 426834 |
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| End bp | 427541 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640579940 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_001260908 |
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| Protein GI | 148553326 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.344138 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0526207 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACCCA CGATCGCCCT GGTCGACGAC GATCGCAACA TCCTGACATC CGTGTCGATC
GCGCTGCAAT CCGAAGGGTT CACGGTCCGG GTCTATTCGG ACGGCGAATC GGCGCTGAAG
GCGCTGCTCG ACAATCCGCC CGACCTCGCC GTGCTCGACA TCAAGATGCC GCGCATGGAC
GGCATGGAGC TGCTGCGGCG GCTGCGCGAG AAGAGCAGCA TCCCGACGAT CTTCCTGACC
TCGAAGGACG ATGAGCTGGA CGAGGCGCTG GGCCTCGCCA TGGGCGCCGA CGACTATATC
ACCAAGCCCT TCTCGCAGCG GCTGCTGATC GCCCGCATCC GCGCGATCCT GCGGCGGACC
GAGGTCCGCG CGACGCCCGA GGACGAGGCC GACGCCACCC CGGTCGAGAA GATCGTGCGC
GGCCGGCTGG AGATGGACCC CGCGCGCCAC CGGGTGCAAT GGGACGGCAA GGACGTGACC
CTGACCGTCA CCGAATTCCT GATCCTGGAA GCGCTGGCCC AGCGCCCCGG ATTCGTGAAG
TCGCGCGACC AGCTCATGGA CACCGCCTAT CAGGACGACG TCTATGTCGA CGATCGCACG
ATCGACAGCC ACATCAAGCG GCTGCGGCGC AAATTCCGGC AGGTCGATCC CGAGTTCAAG
GCGATCGAGA CCCTCTACGG CGTGGGCTAT CGCTTTGGCG AAGAGTAG
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| Protein sequence | MTPTIALVDD DRNILTSVSI ALQSEGFTVR VYSDGESALK ALLDNPPDLA VLDIKMPRMD
GMELLRRLRE KSSIPTIFLT SKDDELDEAL GLAMGADDYI TKPFSQRLLI ARIRAILRRT
EVRATPEDEA DATPVEKIVR GRLEMDPARH RVQWDGKDVT LTVTEFLILE ALAQRPGFVK
SRDQLMDTAY QDDVYVDDRT IDSHIKRLRR KFRQVDPEFK AIETLYGVGY RFGEE
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