Gene Swit_0399 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_0399 
Symbol 
ID5198351 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp423867 
End bp424808 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content68% 
IMG OID640579937 
Producthypothetical protein 
Protein accessionYP_001260905 
Protein GI148553323 
COG category[R] General function prediction only 
COG ID[COG1660] Predicted P-loop-containing kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0132201 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0551853 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAGG CTGGAATGAC AAAGGCCGGA GAGCCACGCC GCATATTGTT CGTCACCGGC 
ATGTCCGGTT CCGGCAAGAA GACCGCGCTG ACCGCGCTCG AGGACATGGG CTGGGAGACG
GTCGACAACC TGCCGGTGTC GCTGCTCGAA CGGCTGCTGG CCGCCAGCCC GGCCGAGGGG
AGCATCGACG AGGGCCGTCC CCTCGCGCTC GGCATCGACA GCCGCACCCG CGATTTCGAC
AGCCGGGGGG TGGTCCGCCG GGTGCGGTCG CTGCGCGACG GCGGGCGCGA TGCGTCGATC
CTCTTCTTCG ACTGTTCCAA TACCGAGCTG AGCCGCCGCT ATTCGGAGAC GCGCGCGCGC
CATCCGCTGG CGCGGGACCG CCAGGTCGAG GACGGGATCA GCTATGAGCG CGAACTGCTG
GCGCCGCTGC GCGAGGCGGC CGACGAGCTG ATCGACACCA CCGACAGCTC GACCAACGAG
CTGCAGGCGC TGCTGCGCCG CCGGTTCGGC GATTCGGCGG GCACGGGGAC GACGCTGACC
GTCATGTCCT TCGCCTTCTC GCGCGGGGTG CCGCGCGACG CCGACCTGAT GTTCGACATG
CGCTTCCTGC GCAATCCGCA CTGGGTGCCC GAACTCAAGC CCCATAGCGG CCTCGATCCC
GACGTTGGCG CCTATATCGC CGGCGACCCG ATCTATCCCG AGGCGCGCGC GCGGATCGAG
GAACTCATTC TCCTCCTGCT GCCGCGCTAC GAGACGGAGG GCAAAAGCTA TGTGACGATC
GCGATAGGCT GCACGGGGGG CAAGCACCGA TCCGTGCATT TCGCCGAAAC CCTCGCAAGC
CGGTTGCGCC AGGAGGGATT TTCGCCCACG GTCCGCCACC GCGATTTGAC TCGACAGAAG
TCGAACGCTG AGGAGAGCAC CGTGCCAGGC GTGGGGTCAT GA
 
Protein sequence
MTKAGMTKAG EPRRILFVTG MSGSGKKTAL TALEDMGWET VDNLPVSLLE RLLAASPAEG 
SIDEGRPLAL GIDSRTRDFD SRGVVRRVRS LRDGGRDASI LFFDCSNTEL SRRYSETRAR
HPLARDRQVE DGISYERELL APLREAADEL IDTTDSSTNE LQALLRRRFG DSAGTGTTLT
VMSFAFSRGV PRDADLMFDM RFLRNPHWVP ELKPHSGLDP DVGAYIAGDP IYPEARARIE
ELILLLLPRY ETEGKSYVTI AIGCTGGKHR SVHFAETLAS RLRQEGFSPT VRHRDLTRQK
SNAEESTVPG VGS