| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0379 |
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| Symbol | |
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| ID | 5198165 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 402321 |
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| End bp | 404006 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640579918 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_001260887 |
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| Protein GI | 148553305 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.547606 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGGCG GAGCGGACGG GCGCATCGAG GACGGCGCCG AGGCCGACTA TGTGATCATC
GGCGCGGGAT CGGCGGGCTG CGTGCTCGCC AACCGGCTCA GCACCGACGG CCGTCACAAG
GTCGTCGTCC TCGAAGCCGG CGCCGACGAC CGGCCGACAC GCAACCTCTC CGATCCGGCC
CAGGCCTTCG CGAACATCAA CATCCACATG CCCGCGGGCT TCACCCGGAT GCTGAAGGAC
CCGAAGGTCA ACTGGAACTA CATGACCGAT CCGGACCCGG GCACCGAAGG GCGACAGCAC
AGCTTCCCGC GCGGCAAGGT GCTGGGCGGC TCCTCGTCGA TCAACGGCAT GCTCTGGGTA
CGCGGCCTGC CCGAGGATTA TCAGGGCTGG CGACAGCTCG GCTGCGACGG CTGGTCGTGG
GACGATGTCG AGCCCTATTT CCGGCGGATC GAGCATCAGC ACGGCGAAGG CCAGGTCAGC
GGGGTGCAGC CGGGCCCGCT CCATGTCAGC GACGTGCCGA TGAAGCACGC CATGCTCGAC
GTCATGACCC GCGCGTTCGA GGAAGCCGGC GCGCCGGTCA GCACCGATCT CAACGGCACC
ACGCGCGAGG GCGTCGCCCG CGTCCGGCTC AACGCCCGCA ACGGCGTGCG CGTGTCGGCG
GCGGTTGCCT ATCTCCACCC GGCGATGAAG CGCCCGAACC TGACGGTGCT GCTCCGCGCC
CACGCCACCC GCATCCTGTT CGAAGGCAAG AAGGCGGTCG GCGTCGACTA TGTGCAGGGC
GGCGTCCGCA GGCAGGTCCG CGCCCGGCGC GAGGTGATCC TGTCGGGCGG CGCGATCAAC
TCGCCCCAGA TGCTCGAGCT GTCGGGCATC GGCGACGGCG AGCGGCTCCG CGCGCTGGGC
ATCGACATAC TCGTCGACCG CCCCCGCGTC GGCGAGAATC TGCAGGACCA TTATGCCGCG
ATGGTCCGCG CGCGGATGAA GCCCGGATCG GCCGGCTTCA ACGAGCTGTC GCGCGGCGTG
CGGCTGGTGG GCCAGCTTCT CCGCTACGCC TTCACCCGCA GCGGCCTGCT GGCGCTGGGC
GGATCGAACC TGACCGCCTT CCTCAAGTCC GATCCGGCGC TCGACCTGCC CGACATCCAG
TTCTTCGCCA GCCCGGCGAC GGTGGATTTC GAAGGGCTCG CCAAGCATGG CACGATGTCG
ATGGAGCGCG CGCCGGGCAT GACCGTCGGC GGCTATGTGA TGCGCCCGCG CTCGCACGGC
TCGATCCACA TCCAGTCGCC CGACTATCGC GACCACCCGT CGATCAAGCC CAACTACCTC
GCCGACGAGG CCGATCGGCG CGCCCAGGTC GCGTCGCTGC GCTGGGCGCG GCGGATCATG
CACAGCCCGG CGCTCGCCCC CTATTTCGAT CATGAGTTGA CCCCCGGCGC GGCGGTCGAC
AGCGACGAGG CGCTGCTCGC CTTCGCGCGG GCGAGCGGAT CGACCGGCTA TCACCAGAGC
TGCACCTGCG CGATGGGGCC GGGCGCGGAC GCGGTGGTCT CCCCCACCCT CCGGGTCAAC
GGCGTCGAGG GGCTGCGCGT CGTCGACGCC TCGGTGATGC CCAACATCGT TTCCGGCAAC
ACCCACGCCG CCACGGTGAT GATCGCCGAG AAGGCCGCCG ACCTGATCCT GGCCGACGCG
CGATAG
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| Protein sequence | MAGGADGRIE DGAEADYVII GAGSAGCVLA NRLSTDGRHK VVVLEAGADD RPTRNLSDPA
QAFANINIHM PAGFTRMLKD PKVNWNYMTD PDPGTEGRQH SFPRGKVLGG SSSINGMLWV
RGLPEDYQGW RQLGCDGWSW DDVEPYFRRI EHQHGEGQVS GVQPGPLHVS DVPMKHAMLD
VMTRAFEEAG APVSTDLNGT TREGVARVRL NARNGVRVSA AVAYLHPAMK RPNLTVLLRA
HATRILFEGK KAVGVDYVQG GVRRQVRARR EVILSGGAIN SPQMLELSGI GDGERLRALG
IDILVDRPRV GENLQDHYAA MVRARMKPGS AGFNELSRGV RLVGQLLRYA FTRSGLLALG
GSNLTAFLKS DPALDLPDIQ FFASPATVDF EGLAKHGTMS MERAPGMTVG GYVMRPRSHG
SIHIQSPDYR DHPSIKPNYL ADEADRRAQV ASLRWARRIM HSPALAPYFD HELTPGAAVD
SDEALLAFAR ASGSTGYHQS CTCAMGPGAD AVVSPTLRVN GVEGLRVVDA SVMPNIVSGN
THAATVMIAE KAADLILADA R
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