Gene Swit_0372 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_0372 
Symbol 
ID5198911 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp394708 
End bp395946 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content70% 
IMG OID640579912 
Producthypothetical protein 
Protein accessionYP_001260881 
Protein GI148553299 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAACC CGATCGCGAA CGCCGACCAG TTCGCCGCCG AGGAAGAGGT GCGGCACATG 
TGGGCGCTGC CGCAGACCCG CGCGGCGCGC GACCATGCCG CGCAGCTCTG GCGCGTCGGC
CACGGCACCG ACATCCCCGA CGGCCTGCTC GACAGCTTCG ACGGCGCCAT GGACGGCTGG
GTCACCAACT ATCTGTTCAA GGCGACGACG ATCGATCCGG CCGCGCCGCG CATCGTCCGC
AACTTCATGC CTGGCTATCG CTGGCAGGGC GGCGACGTTC CCGACGCGCG CATGGGTGGT
GACAATCCCG ACAATTGCTA CCGCCTCGCC GGCATCGCGC CGGGGGGCCG CTACCGGATC
AGCGGCCGCA TCCTCGACGC CCGGCCCGCC CATGCCTCCT TCACCCTGGT CGAGAATTGG
GGGACGTCGG TCACCGCCCA GACGCTCGAA CTGCCGGGCA TCGCGGTCGA CGAGGACGGC
CGCTTCACGA TCAGCATCGA CGGCGATCCT GCCGATGGCC GGCCCAATCA CCTGACCAGC
ACGCCGCGCA CCAAATTCCT GTTCATCCGC GACAGCATGA TGGACTGGGG ACACGAGACC
CCGCTCGACC TCGCCATCGA ACGGCTCGAC GCCGCCGCGC CGCTGGACCT CGAACAACGG
CTCGACGAGG CGCTGCGGCG GATGCGCGAG GACGTGCCGC TCTATTACTG GTTCTTCCGC
CTCTCGGCGG GCAAGCCGGT CAACACGATG GTCCAGCCGG TCGCGGTCGC CGGCTATGGC
GGCCTCGTCA CCCAGGCGAG CAGCCTCGGC CGCTTCCACC TGGAGGACGA CCAGGCCGCG
ATCGTCCGCT TCGATCCGGC GGGGGCCTGC TACAACAGCT TCCAGATGGC GATGTGGTGG
TATCGCTCGA TCGACGCGCA CCGTATCCAG TCGGGCCTCA CCGCCGCCCA GGCCGAGCAT
GATGCCGACG GCACGATCAG CCTGGTGGTC TCGGCGCGCG ATCCGGGGAT CGCCAACTGG
GTCGACACGG GCGGGCTCAA GGACCTGCTG CCGATGATCC GCTGGCAGGG CATCCCCGCG
ACCCAGGTCC GCAAGGGCCC GCGCCACTGG CTCGACATCG TACCCTTCGC CGAGATCGAC
CGGCATGTCT CCGCCGACGC GACGCGCGTC GACGCCGCCG AACGCGCCGC CCGCATCGCC
CGGCGGCAGC GCGAATGGGA CCGGCGGACG ACCGCCTAA
 
Protein sequence
MTNPIANADQ FAAEEEVRHM WALPQTRAAR DHAAQLWRVG HGTDIPDGLL DSFDGAMDGW 
VTNYLFKATT IDPAAPRIVR NFMPGYRWQG GDVPDARMGG DNPDNCYRLA GIAPGGRYRI
SGRILDARPA HASFTLVENW GTSVTAQTLE LPGIAVDEDG RFTISIDGDP ADGRPNHLTS
TPRTKFLFIR DSMMDWGHET PLDLAIERLD AAAPLDLEQR LDEALRRMRE DVPLYYWFFR
LSAGKPVNTM VQPVAVAGYG GLVTQASSLG RFHLEDDQAA IVRFDPAGAC YNSFQMAMWW
YRSIDAHRIQ SGLTAAQAEH DADGTISLVV SARDPGIANW VDTGGLKDLL PMIRWQGIPA
TQVRKGPRHW LDIVPFAEID RHVSADATRV DAAERAARIA RRQREWDRRT TA