| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0362 |
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| Symbol | |
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| ID | 5199793 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 383666 |
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| End bp | 384658 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640579902 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001260871 |
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| Protein GI | 148553289 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.872032 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.990954 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGAGG ACATCCGCTT CGACGGCCGC GTCGCCGTCA TCACCGGAGC CGGCAACGGG
CTCGGCCGCG ACTATGCGCT GGAGATCGCG CGGCGCGGCG GCGCGGTGCT GGTCAACGAC
CTGGGCGGCA GCGGCGCGGG CGTCGGCGCC TCGCGCAACG CCGCCGACGC GGTGGTGGAC
GAGATCCGCG CCGCGGGCGG CAAGGCGGCC GCCAACCATG ACAGTGTCGC CACCCGCGCC
GGTGGCGAGG CGATCGTCGC CGCCGCGGTC GAGGCGTTCG GCAAGGTCGA CATCGTCATC
AGCAATGCCG GCTTCCTGCG CAACGCCCGC TTCGAGGATA TCGACGACGA CCGGCTCGAC
GCGCTGATCG ACGTCCATCT GAAGGGCGCC TTCTACGTCG CCCAGCCCGC CTACCGGATC
ATGCGGCGGA ACGGCTATGG CCGCTTCGTC TTCACCGGAT CGGCGAGCGC GATGTTCGGC
CATGCCTGGC AGGCCAATTA TGCCGCCGCC AAGGGCGGTC TGATGGGGCT GAGCCATATC
GTCGCGATCG AGGGATCGGC CTATGGCATC ACCTCCAACC TCCTCCTGCC CACCGCCCAG
TCGCGGCTGA TGGCGGAGAT GGACGACGGC TTCATGGAGA TACCGGACTT CGCCCGGTCG
GTGCAGGAGG CCGATTATTC GGCGGTGCAG GACCGGCTGC TGCCGGCGTT CAACACCCCC
CTCGCCCTCT ATCTCGCCAG CGAGCGATGC CGGACGACCC ACGGCATCTT CAGCGCCAAT
GGCGGCCGCT ATGCGCAGGT GCTGATCCAG GCGACGCAGG GCTGGATTTC CCCGGCGGGG
TCCGAGGCAC CGAGCGTCGA GGACGTCGCC GGGCATTTCG ACCGGATATG CGACGCCACG
ACACTACACC GGCCGATGAC CGTCTATGAC GAGTTCACCG CCGTCGCCGC CGCCGCGCGC
GAGCGCGACA TGACCGGCGC CCCCGCCGCC TGA
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| Protein sequence | MAEDIRFDGR VAVITGAGNG LGRDYALEIA RRGGAVLVND LGGSGAGVGA SRNAADAVVD
EIRAAGGKAA ANHDSVATRA GGEAIVAAAV EAFGKVDIVI SNAGFLRNAR FEDIDDDRLD
ALIDVHLKGA FYVAQPAYRI MRRNGYGRFV FTGSASAMFG HAWQANYAAA KGGLMGLSHI
VAIEGSAYGI TSNLLLPTAQ SRLMAEMDDG FMEIPDFARS VQEADYSAVQ DRLLPAFNTP
LALYLASERC RTTHGIFSAN GGRYAQVLIQ ATQGWISPAG SEAPSVEDVA GHFDRICDAT
TLHRPMTVYD EFTAVAAAAR ERDMTGAPAA
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