Gene Swit_0353 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_0353 
Symbol 
ID5199589 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp373835 
End bp375007 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content65% 
IMG OID640579893 
Producthypothetical protein 
Protein accessionYP_001260862 
Protein GI148553280 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.760546 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGAACT GGGCCGACTA TGCGGACCTG CTCAAACCGG CGGCGGAACT GCTCGCCCGC 
ACCCATTCCC CCGACAGCGA GGCGATGAAG GCGCAGTTGT GGCGCCAGTT CGCGATGAAC
CTGTCGCAAG GCTATTTCCT GCTGTTCCAG TCGACCCCCG ACCATCCCGA ATTCGCGCCC
TTCGAGAATT CGGTGTTCCT CGCCCAGCCC AACCCCGACG CGGTCTATTA TTACGCCCCG
GTCGACGGCA ACGGCACCTA TCGGGTGACC GGCGAGCGCG GCAATGCGCC GGTCGCCGGC
TTCGCGCTGG GCAACAGGAT CATCGGCATG GACCCGCTGC CCGGCAAGGG CCTGGGCAAT
CATGACTTCG ACGATCTGGA GATCGACGCC GACGGGCGTT TCGAGGTGAT CTTCAGCTGC
GAACGTCCTG TAGGTTATCG TGGCAACTGG CTGAAATTAC CTGAGGAAAC CGACTTCATC
CTGGTCAGGC AATTCTCCTA CGACTGGGGT AACGAACGCG ACGTCCGCCT CGCCATCGAG
CGTCTCGACG CGCCGCCGAT CCGTCCGGCC CTCACCCCCG CGCAGGTCGA CGCGAAGCTC
GCCCATCTGT TCGGCGGCTA TGCGCGCAAC CTGTCGCAGA TTTCGATCGG CGCGGTCGCC
CGCTGCGCCG AGCAGGGCTT CGTCAACCGC TTCAACCTCA CCAGCTTCCA GGAACTGGGC
AACGGCAAGG ACTGGCCGCA AGCCTATTGG GAGACGGTGT TCGACATCGC CGAGGACGAG
GCGCTGATCA TCGAATCCGA GCTGCCGGAG CAGCGGCCCT ATTGGAACAT CCAGGTGATC
GACGGGCTGT GGAACCAGGT CGACTATGTC TATCGCCAGT CGAGCCTCAA CGGCCTCCAG
GCGACGGTCG ACGCCGACGG CAAGTTCCGC GCGGTGCTGG CGCATCGCGA TCCCGGCGTC
GCCAACTGGC TCGACACCGG CGGCAATCTA TACGGCATGC TGATCGGCCG CTGGTATCGC
TGCTCGGGGC ACCCGACGCC GAGCGTCACC CGCGTGAAAT TCGCCGATCT CGACCGGCAC
CTGCCCGAGG GCGTGGCCCG GATCGGCGGC GATGAACGCG CCGAGGCGCT GCGCCGCCGC
CGGATCGGAT CGCAACTCCG CCGCAAATGG TAG
 
Protein sequence
MRNWADYADL LKPAAELLAR THSPDSEAMK AQLWRQFAMN LSQGYFLLFQ STPDHPEFAP 
FENSVFLAQP NPDAVYYYAP VDGNGTYRVT GERGNAPVAG FALGNRIIGM DPLPGKGLGN
HDFDDLEIDA DGRFEVIFSC ERPVGYRGNW LKLPEETDFI LVRQFSYDWG NERDVRLAIE
RLDAPPIRPA LTPAQVDAKL AHLFGGYARN LSQISIGAVA RCAEQGFVNR FNLTSFQELG
NGKDWPQAYW ETVFDIAEDE ALIIESELPE QRPYWNIQVI DGLWNQVDYV YRQSSLNGLQ
ATVDADGKFR AVLAHRDPGV ANWLDTGGNL YGMLIGRWYR CSGHPTPSVT RVKFADLDRH
LPEGVARIGG DERAEALRRR RIGSQLRRKW