| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0347 |
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| Symbol | |
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| ID | 5199917 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 368892 |
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| End bp | 369896 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640579887 |
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| Product | transketolase, central region |
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| Protein accession | YP_001260856 |
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| Protein GI | 148553274 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTACCC AGACCGCTGC CAAGCCCGCC AAGGCCAATA TCCTCCAGGC GATCAACGCC
GCCATCGCCG ACGCGATGGA GGCCGACGAC AATGTCGTCG TGCTCGGCGA GGACGTCGCC
GATCCCGAGG AGGGGGGCGT CTGCGGGGTG ACCAAGGGGC TGTCGTCGCG CTTCGGCGAT
GCGCGCGTCC GCTCGACCCC GATCTCCGAG CAGGCGATCG TCGGCGCCGC GATCGGCGCT
TCGCTGGTCG GCTTCAAGCC GGTCGCGGAG ATCATGCTGA TGAACTTCAC GACGGTGGCG
ATGGACATGA TCGTCAACCA CGCCGCCAAG CTGCGCTTCA TGTCGGGCGG GCAGACCCAT
GTGCCGATCG TGATCCGCAC CATGACCGGC ACCGGCTTCG CCTCGGGCGG GCAGCATTGC
GACTATCTGG AGGCGTGGTT CGCCCACACC GCCGGGATCA AGGTGGTGGC GCCGTCCAGC
CCGCGCGACG CCTATGGCCT GATGCGCAGC GCGATCGACG ATCCCGATCC GGTGCTGTTC
ATCGAGAATC TGCCGACCTA CTGGACCCCG GCCGAAGCGC CCGAGAAGGA CCATCGCGTG
CCGATCGGCA AGGCGAAGCT GCTGAGCGAG GGCAGCGACA TCACCATCAT CGCCTATGCC
CGGATGATCC AGGAGGCGCT GCCGGCGGTC GCCCAGCTCG CCGAGGCGGG AATCTCGGCC
GAGCTGATCG ACCTGCGCAC CATCGCCCCC TGGGATCGCG ACACCGTGCT GGCGTCGGTC
GCCAGGACCG GCCGGGCGAT GATCGTGCAC GAGGCGGTGA CCCCGTTCGG GGTCGGCGCC
GAGATCGGCT CGGTCCTGAA CGAGGAGCTG TTCGGCAAGC TCAAGGCGCC GGTGAAGCGA
CTGGGCGGCG CCTTCTGCGC GGTGCCCTTC TCCAAGCCGC TGGAGACCGC CTTCGCGCCG
CAGACCGCCG ATATCGTTGC CGCCGCCAAG GCGCTGATGG CCTGA
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| Protein sequence | MATQTAAKPA KANILQAINA AIADAMEADD NVVVLGEDVA DPEEGGVCGV TKGLSSRFGD
ARVRSTPISE QAIVGAAIGA SLVGFKPVAE IMLMNFTTVA MDMIVNHAAK LRFMSGGQTH
VPIVIRTMTG TGFASGGQHC DYLEAWFAHT AGIKVVAPSS PRDAYGLMRS AIDDPDPVLF
IENLPTYWTP AEAPEKDHRV PIGKAKLLSE GSDITIIAYA RMIQEALPAV AQLAEAGISA
ELIDLRTIAP WDRDTVLASV ARTGRAMIVH EAVTPFGVGA EIGSVLNEEL FGKLKAPVKR
LGGAFCAVPF SKPLETAFAP QTADIVAAAK ALMA
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