| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0344 |
|---|
| Symbol | |
|---|
| ID | 5197579 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | - |
|---|
| Start bp | 365654 |
|---|
| End bp | 366424 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640579884 |
|---|
| Product | enoyl-CoA hydratase |
|---|
| Protein accession | YP_001260853 |
|---|
| Protein GI | 148553271 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.458261 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGATCA GTGTCGAGAA ACGGGGAGCG GTCGCGATCG TGACGCTCGA CCGCCCCGAA
ACCAGGAACG CGATCACCCA GGAGATGCGC GGCCAGCTCT ACGGCGCCTT CGAGCAGATC
GCGCTCGACC ATGATATCCG CGCCGCGATC CTGACCGGCG CGAACGGCGC CTTCTGCTCG
GGGATGGACG TCGGCGGCAT GGGCCGGGGC GGCGTGACCG GATCGATGGA CCGGATGTAC
ACGCTCAACC GGATCGCGCG GGCGATCCAC ACGCTCAAGA AGCCGACCAT CGCGGCGGTG
CCGGGCATCT GCGTCGGGGT CGGCTGGTCC TACGCCCTCG CCTGCGACAT CGTGCTGGCC
GCCGAGAAGG CCAGGTTCGC CGCGATCTTC CGCAACATCG CGCTGGCGCC CGACGGCGGC
CTCGTCTGGC AGCTCCGCCA GCAGATCAGC GTCCAGAAGG CCAAGGAGCT GGTCTATTCA
GGCCGGATCA TCGGCGCCGA CGAGGCGCTG GCGATGGGCC TGGTGTTCGA GAAGACGTCC
GACGAAGGGC TGATGGAGCG CGCAATGGAG TTGGCCGAGA GCTTCGCCGC CGGCCCCAGC
ATCGCGATGG GCCTCGCCAA GCGCCAGTTC GACCTCTCCT GGAACGCCGG CTTCGAGCAA
TATCTCGACA TGGAGTTCAC GATGCAGCCG ATCGCGAGCC GCAGCGAGGA CCATGAGGAG
GGCCTCCGCG CCTTCCGCGA GAAGCGCAAG CCGGTCTTCA AGGGGGAATG A
|
|---|
| Protein sequence | MTISVEKRGA VAIVTLDRPE TRNAITQEMR GQLYGAFEQI ALDHDIRAAI LTGANGAFCS
GMDVGGMGRG GVTGSMDRMY TLNRIARAIH TLKKPTIAAV PGICVGVGWS YALACDIVLA
AEKARFAAIF RNIALAPDGG LVWQLRQQIS VQKAKELVYS GRIIGADEAL AMGLVFEKTS
DEGLMERAME LAESFAAGPS IAMGLAKRQF DLSWNAGFEQ YLDMEFTMQP IASRSEDHEE
GLRAFREKRK PVFKGE
|
|---|
| |