| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0334 |
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| Symbol | |
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| ID | 5200966 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 356443 |
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| End bp | 357327 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640579874 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001260843 |
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| Protein GI | 148553261 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.0588577 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGAGC TCGACTTCAC CGGCCGCACG GCGATCGTCA CCGGCGCCGC CAAGGGCCTC
GGCCGCGCCT ATGCCCGCTG GCTCGCCGCG CGCGGCTGCG CGGTGGTCGC CAGCAACCGG
CCGGCGGCGG ACGGCGGCTC GGCGGCGCAG GCGACCGTGG ACGAGATCGT CGCGGCCGGC
GGCCGCGCGG TGGCGCATGA CGGGCCGGTC GAATCCGAGG CGGCGGCGGC CGAGCTGGCC
GATCTCGCGC TCAGCCGCTT CGGCGGGATC GACATCCTCG TCAGCAATGC GGGGGTGGTG
CGCTGGGGCG AATTCGGCGC AGTCACCGCC GACGATATGC GCGAGGTGAT CGACATCAAC
CTGTGGGGCT GCATCCATGG GCTGAAGGCG GCGTGGCCGG CGATGACGGC GCGCGGCTAT
GGCCGGATCG TCCTCACCGC GTCGAGCGCG GGGCTGTGGG GCCAGATGCG CTCGCCCGCC
TATGGCGCCT CGAAGGCGGC GATGATCGGC CTCGCCCGCT CGATCGCGCT CGACGTGCCC
GAGGGCGCCG ATATCCGGAT CAACGTGATC GCGCCCGCCG CCTATACGCC GATGTCGGCG
GCGCATTTCG ACGAGAAATG GGCCGATTAC GCCTCGGCCG ACCGGGTCGC CCCGGTGGTC
GGCTGGCTGG CGAGCGATCG CTGCGGCAGC TCGGGCGGCA TCTATCATGC CGGCGCCGGC
CATGTCCGCC GCGTCCAGAT CCTCGAAGGG CCGATCGAGG AACTGTCGAG CGGCCCGATC
GACGAGGTGA TGGCGCGATT GGAGCCCAAG CCCGAATGGA CCAGCTCCTT CGCCTCGGGC
GCCGAGCTGA TGCCCGAGCT GGCCAACGCG GCGAACGGCT CATGA
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| Protein sequence | MAELDFTGRT AIVTGAAKGL GRAYARWLAA RGCAVVASNR PAADGGSAAQ ATVDEIVAAG
GRAVAHDGPV ESEAAAAELA DLALSRFGGI DILVSNAGVV RWGEFGAVTA DDMREVIDIN
LWGCIHGLKA AWPAMTARGY GRIVLTASSA GLWGQMRSPA YGASKAAMIG LARSIALDVP
EGADIRINVI APAAYTPMSA AHFDEKWADY ASADRVAPVV GWLASDRCGS SGGIYHAGAG
HVRRVQILEG PIEELSSGPI DEVMARLEPK PEWTSSFASG AELMPELANA ANGS
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