| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0333 |
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| Symbol | |
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| ID | 5200965 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 355496 |
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| End bp | 356446 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640579873 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001260842 |
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| Protein GI | 148553260 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.0535694 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCGCT TCGACGGACA GGTGGCGATC GTCACCGGCG CGGGCGGCGG CATGGGCCGC
GCCTATGCGC TCGAACTGGC GCGGCGCGGG GCGCGGGTGC TGGTCAACGA CTATGGCGGC
GGCGTGCTGG GGCAGCAGGA CGGCACGCCC GGCCCGGCGG AAGCCGTCGC CGCCGAAATT
CGCGCGGCGG GCGGTCAGGC CGAGGCGAAC GGCCAGGCCG TCGGGACCGC CGACGCGGCC
CGCGCCATCG TCCGCGCCGC GCTCGACGCC TTCGGGCGGG TCGACATCCT CGTCAACAAT
GCCGGCACCG CGCTGGCCGG TTCCTTCACC AGCCATCGGG ACGAGGATAT CGAGCGCCAT
TATGCGACCA ACCTGATCGG CGGCCATCAT CTGATGCGCG CGGTATGGGC GCTGATGGCG
GTGCAGGGCT ACGGCCGCAT CCTCAACATC AGCTCGAACG GCGCGCTCGG CGTCGGCGGC
AACGCGCCCT ATGCGGCGGC CAAGGCGGGC ATGATCGGCC TCACCCTTGA CGCCGCGATC
GAGGGCCGGC CGCTCGGCAT CCTCGTCAAC GCGGTGATGC CGACATCCTA TTCGCGGATG
ATCGAGCAGA TTCCCGACCC GGCGACGGTC GCCTGGTTCC GCGACCATCT CCCGCCCGAA
CAGGTCGCCG CGGCGATGGC CTGGTTCCTG AGCCGCGACT GCACCCTGTC CGGCCGCATC
TGGCTGACCG GCGGCGGGCG GCTGTCGAGC CTGGTGATGG CCGAGACCGG CGAAGTCTGC
GATCCGACCC TCGGCGCCGA GCAGGTCGCG GGGGTGCTCA ACCGGATCAT CGACGAGAGC
CGACTGACCG TGGTCCACGA CCAGGCCGAA GCCGGCGCCC GCTATTTCGA GCATTTCCCC
TGGACCGCCA CGGCCAGCGC CGACTTCGGC CCCGAGGTGG AACGGGGATA G
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| Protein sequence | MIRFDGQVAI VTGAGGGMGR AYALELARRG ARVLVNDYGG GVLGQQDGTP GPAEAVAAEI
RAAGGQAEAN GQAVGTADAA RAIVRAALDA FGRVDILVNN AGTALAGSFT SHRDEDIERH
YATNLIGGHH LMRAVWALMA VQGYGRILNI SSNGALGVGG NAPYAAAKAG MIGLTLDAAI
EGRPLGILVN AVMPTSYSRM IEQIPDPATV AWFRDHLPPE QVAAAMAWFL SRDCTLSGRI
WLTGGGRLSS LVMAETGEVC DPTLGAEQVA GVLNRIIDES RLTVVHDQAE AGARYFEHFP
WTATASADFG PEVERG
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