| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0330 |
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| Symbol | |
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| ID | 5200887 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 351788 |
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| End bp | 354121 |
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| Gene Length | 2334 bp |
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| Protein Length | 777 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640579870 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001260839 |
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| Protein GI | 148553257 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.030228 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTTTCC GCAGAACCTG TCTCCTGGCT TGCGCGGCCT CGCTGCTGCC GCAGCTCGCG
GCGGCGCAGA CGGCTTCGCC GCCCGCCGAG GCCGAGGCTG CCGTCACCGG CGCCGCCGAC
AGCGGCGAGA TCATCGTCAC CGCCCGCCGC CGCGCGGAAT CGCTGCAGGA CGTGCCGATC
TCGGTCAGCG CGATCTCGGG CAAGGCGCTG ACCCAGGGCG GAGTCACCGA CGCGCTCAGC
TTCCAATCGC GGGTGCCGTC GCTCAGCCTC ACCAACCAGG GCACCACCCG GTCCGAGCTC
GGCTTCTCGA TCCGCGGCCA GCGCACCCAG GAATCGCAGC TTCTCACCGA TCCGCCGGTC
GGCACCTATT TCGCCGAGGT GGTGCAGGCG CGCAGCACCG GCTTCGCCAA CACGCTCTAC
GACCTGGAGT CGGTGCAAGT GCTGAAGGGC GTGCAGGGCA CGCTGTTCGG GCGCAACATG
ACCGGCGGCG CGGTGCTGGT CGAGCCGGCC AAGCCGACCG ACCAGCTCGC CGCCGAGGTG
CGCGGGCAGA TCGGCAATTT CGACCTGCGC GACGCCTATG CGATGCTCAA CCTGCCGATA
TCCGACGGGA TCGCCGTCCG CTTCGCCGGC AAGACCCATG AGCGCGACGG CTTCACCAAG
GACGTCAGCA GCGGCCGCGA TTATGACGAC CAGAATTACG ACACGTTCCG CGTCTCGCTG
GCGATCAACC CGGCGGAGAA CATCGAGTCG ACCACGATCT TCGACTGGGT CCGCACCCGC
GAGCACGGCA CCGCGCTGGT CGGCACCGCC GCCAACCCCG CCGCGCCGGC GATCGCCGGC
TATGCGGCGC TGCGCGGCTT CGGCATTCCG GTGTCGGACG TGCTGGCGCA GTTCGCCGCG
CAGGCCGCGC GCCCGCACTA TCGCTTCGAC ACGGCGGCGG GCGAGGACGG CACGCTCGAC
GCCTATGGCG TCAAGCCGTT CGAGCATCTG AAGAATTACG GGATCACCAA CCGCAGCTCG
ATCGACCTGG GCGGCGTCAC GATCAAGAAC ATCTTCGGCT ACCGCCGGCT CAAGTTCAAC
CAGATCATGG ACCTGGACGG CGTCCCCGCC TTCCTGATCA ACAGCAACCG CTTCCGCGAC
ATCAAGCAGT ATAGCGAGGA GCTTCAGGCG CAGGGCAAGG CGTTCGACGA CCGGCTGACC
TATGTGGTCG GCGCCTATTA TTTCCTGGAG AAGGGCACCG ACGGATCGAC GTCGAGCCAG
TTCCCCGAAC TGGCGATCGC CGGCCAGGGC CTGCCGCTGA CCACGCCGGC CTCGACCTTC
CTCAACGCCT ATGTCGGGCA GGGCAGGGCG AAGACGGGGG CCCTCTACGC GGCGGGCACC
TATAATTTCA CCAACCAGTT CAAGCTCTCG GCCGGCATCC GCTACACCGA GGACAAGCGC
CGCGCGACGG TGACCGCCTA TTATCCCAAT CTCGGCGCCT GCCTGTTCCG GCTCGCCGAC
GGCACCACGC CGAGCCTCGC GAACTGCCCG CAGACCAATG CCAAGAAATG GGACGACGTC
ACCTGGGACG TGACCCTGCA ATATGAGCCG AACGACGGCC TCACCGCCTA TGTCTCCACC
CGGCGCGGCT TCCGCGCGGG CGGCTTCTCG CTACGGGCGG CCTCGACCGC CGAACTGGCG
CCGTTCAACC CGGAGACGGT GCAGGAATAT GAGATCGGCC TGAAGAACCG GGCCGACCTC
GGCGGCGGCG CGGCGCTCAG GACCAGCCTC GCGCTGTTCT ACCAGGATTA CAAGAACGTC
CAGAAGCAGG CCTCGTCGAT CGACGCGGCC GGCAACGTCA ACACGATCAT CACCAACACC
GCGCGGCAGA AGCATTATGG CGGCGAACTG GAGGCGACCC TGTCCGCCGG GGCGATCGAC
CTGACCGCCT TCTATTCCTA TGTGAAGGTC GACATCAGCA AGGGCCGGCA GCCCGGCGAG
TTCGAACTGG TCGGCGCGCC GCATCACCAG CTCGGCGCCA ATCTGAGCTA CCGCCTGCCG
CTGTCGGAGA GCGTCGGCGC GGCCTCGCTC AACGCCAATG TCGCCTATCG GAGCAAGCAG
CATCTCGACA AGAACGACGT GCTCGCCACC GAGCCGGGCT ATGCGCTCGT CAACCTGCGC
GCGAACCTCG ACAATATCGC CGGCACCGGC TTCGGCGCGG CGCTGTTCGT TAACAACGCC
ACCGACAAAT ATTATCGGAT CGGCGTGATC GGCATCTACA ACGAGGCCGG TTACATCTCG
AGCGTCTATG GCGAGCCGAG GACCTACGGC CTGGAGGTTT CGTACCGCTT CTGA
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| Protein sequence | MAFRRTCLLA CAASLLPQLA AAQTASPPAE AEAAVTGAAD SGEIIVTARR RAESLQDVPI
SVSAISGKAL TQGGVTDALS FQSRVPSLSL TNQGTTRSEL GFSIRGQRTQ ESQLLTDPPV
GTYFAEVVQA RSTGFANTLY DLESVQVLKG VQGTLFGRNM TGGAVLVEPA KPTDQLAAEV
RGQIGNFDLR DAYAMLNLPI SDGIAVRFAG KTHERDGFTK DVSSGRDYDD QNYDTFRVSL
AINPAENIES TTIFDWVRTR EHGTALVGTA ANPAAPAIAG YAALRGFGIP VSDVLAQFAA
QAARPHYRFD TAAGEDGTLD AYGVKPFEHL KNYGITNRSS IDLGGVTIKN IFGYRRLKFN
QIMDLDGVPA FLINSNRFRD IKQYSEELQA QGKAFDDRLT YVVGAYYFLE KGTDGSTSSQ
FPELAIAGQG LPLTTPASTF LNAYVGQGRA KTGALYAAGT YNFTNQFKLS AGIRYTEDKR
RATVTAYYPN LGACLFRLAD GTTPSLANCP QTNAKKWDDV TWDVTLQYEP NDGLTAYVST
RRGFRAGGFS LRAASTAELA PFNPETVQEY EIGLKNRADL GGGAALRTSL ALFYQDYKNV
QKQASSIDAA GNVNTIITNT ARQKHYGGEL EATLSAGAID LTAFYSYVKV DISKGRQPGE
FELVGAPHHQ LGANLSYRLP LSESVGAASL NANVAYRSKQ HLDKNDVLAT EPGYALVNLR
ANLDNIAGTG FGAALFVNNA TDKYYRIGVI GIYNEAGYIS SVYGEPRTYG LEVSYRF
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