| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0316 |
|---|
| Symbol | |
|---|
| ID | 5199004 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | + |
|---|
| Start bp | 334667 |
|---|
| End bp | 335632 |
|---|
| Gene Length | 966 bp |
|---|
| Protein Length | 321 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 640579856 |
|---|
| Product | alcohol dehydrogenase |
|---|
| Protein accession | YP_001260825 |
|---|
| Protein GI | 148553243 |
|---|
| COG category | [C] Energy production and conversion
[R] General function prediction only |
|---|
| COG ID | [COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCCGC CCGCCAATAT CGGCCTGCTG GCCGGGACGG CGGACGGCGT CCGTTTCGAA
CCCCAGGCGA TGCCCGATGC GCCGGGGCCG GACGGCCTGA CCGTCCGGAT GCTGTTCGCG
CCGGTCAACC CCGCCGACCT GCTGGCGATC GACGGCGGCT ATGCCTTCGC GCTCGCCGCC
GACGATCCGC TGGGGGCAGA GGGCGTCGGC GTCGTAGAGC AGGCCGGATC GCGGGTGAGC
GACCTCGGCC CCGGCGACCT CGTCCTGCCG CTCGATCGTG GAAACTGGAC CCGCTATCGC
GCGGTGGCGC GAGACCGGGT GCTCGCGGTT CCGCCCGGTG TCGATCCCCG GCAGGCGGCG
ATGATGCGGA TCAATCCCGC CACCGCCTGG CTGCTGCTCG CCGCGAGCGG CGCGGGGCCG
GGCGACTGCC TCGTCCAGAA CGCCGCCGGC TCGACCGTCG CGCATTGGGT GCGCCGGCTG
GCGGCGCTGC GCGACGTCGC GGTGATCGAC GTGGTCCGCC CCGGCGCGTC GGCGCCGGGT
CTTGCCGACG ACGAGCATCT CGAAGCGGCG GTGAAGGCCG CGAGCGGCGG CCGGCGGGTC
CGCGCCGCGC TCGACTGCGT CGCCGGCGAT GCGACCGGCC GGATGGCGGC CTGCCTCGAC
GCCGAGGGGA CGGTCCTCGT CTTCGGCCAT CTCTCCGGCG AACCCTCCAC CATTCGTTCG
CAACTGCTCA CCGGGCGCGG CCTGACGGTG CGGGGCTTCA GCCTGCGCCC CGCCGAGGCG
AGAATGACCC CGGCGGCGCG CGACGCGATG GTCGCCGGGC TCTGGGCCGC GGCCGGGCAG
GGCGCCGTCG AGCTGCCGAT CCGCGCCGTC CTGCCTCTCG CCGAAGCGGA GCGGGCGATC
GCGCTGGCGC GGACGCCGGG GCGGGGCCGG GTGCTGATCG ATCTCGACGC GATATCGGGC
ATGTGA
|
|---|
| Protein sequence | MSPPANIGLL AGTADGVRFE PQAMPDAPGP DGLTVRMLFA PVNPADLLAI DGGYAFALAA
DDPLGAEGVG VVEQAGSRVS DLGPGDLVLP LDRGNWTRYR AVARDRVLAV PPGVDPRQAA
MMRINPATAW LLLAASGAGP GDCLVQNAAG STVAHWVRRL AALRDVAVID VVRPGASAPG
LADDEHLEAA VKAASGGRRV RAALDCVAGD ATGRMAACLD AEGTVLVFGH LSGEPSTIRS
QLLTGRGLTV RGFSLRPAEA RMTPAARDAM VAGLWAAAGQ GAVELPIRAV LPLAEAERAI
ALARTPGRGR VLIDLDAISG M
|
|---|
| |