Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_0257 |
Symbol | |
ID | 5196911 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 265209 |
End bp | 266009 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 640579797 |
Product | ABC transporter related |
Protein accession | YP_001260766 |
Protein GI | 148553184 |
COG category | [H] Coenzyme transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.80562 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0615172 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGACCC TGTCGATCGA GGCGCTGCGG ATCGATCTCG GCGGCCGCGC GATCCTGCAT GGGATCGATG CCGAGATGCG CTCGGGCAGC CTCGTGGGCG TCATCGGCCC CAACGGCGCC GGCAAGTCCA CGCTCGCGCG CGCCGTGACC GGGCTGCTCC GCTCGGCCTC CGGGCGCGTC GCGATCGACG GGACCAACGT CCGCGCCTTT TCTCCCGCCG ACCTCGGCCG CCGCATCGCC TATCTGCCGC AGGGGCAGAC GGTGCATTGG CCGCTGACGG CCGAGCGACT GGTCGCGCTC GGCCGCCTGC CCCATCTCGC CCCCTTCTCG GCGATGGCGC GCGCCGATCG CGACGCGGTC GAGCGGGCGA TGGCGCGCGC CGACATCGGC GGCCTGCGCG ACCGGGTCGT CACCGAACTG TCGGGCGGTG AGCGCGCCCG CGTGCTGATC GCCCGCGCGC TGGCGGCCGA GGCGCCGGTG CTGGTGGTCG ACGAGCCGCT CGCCGCGCTC GACCCCGGCC ACCAGCTCGA ACTCATGGAC CTGATGCGCG CCGAGGCCGA AGCGGGGACA CTCGTCCTGC TGATCCTCCA CGACCTGGCG ATGGCCGCGC GCTTCTGCGA CCGGCTGCTG CTGCTCCATG AAGGTCGGCT GGTCGCGGAC GGCGCTCCCG GCGCGGTGCT GACCCCCGAA TATTTGAGCG ACTGCTATAA TATTCGCGCC TGGACCGGCA CGATCGAGGG TCAGGCGGTG GTGCTGCCGA TCGAGCGGTC GTCGCCGCCC GGCGCGGCGA AGCTGAGATA G
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Protein sequence | MVTLSIEALR IDLGGRAILH GIDAEMRSGS LVGVIGPNGA GKSTLARAVT GLLRSASGRV AIDGTNVRAF SPADLGRRIA YLPQGQTVHW PLTAERLVAL GRLPHLAPFS AMARADRDAV ERAMARADIG GLRDRVVTEL SGGERARVLI ARALAAEAPV LVVDEPLAAL DPGHQLELMD LMRAEAEAGT LVLLILHDLA MAARFCDRLL LLHEGRLVAD GAPGAVLTPE YLSDCYNIRA WTGTIEGQAV VLPIERSSPP GAAKLR
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