Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_0256 |
Symbol | |
ID | 5196910 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 264316 |
End bp | 265269 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640579796 |
Product | glycosyl transferase family protein |
Protein accession | YP_001260765 |
Protein GI | 148553183 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.759794 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0678648 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCCCG ATATCGCCGT GATCCTGCCC TGCTACAACG AGGAAGCGGC GATCGGCGCG ACGGTCGCGG CTTTCCGCCG GGCGCTGCCC GACGCGCGCA TCTACGTGTT CGACAACAAT AGTCGCGACC GCACGGTCGA GGTCGCCCGC GCCGCCGGCG CGATCGTCCG GACCGAGCGG ATGCAGGGCA AGGGCCATGT CGTGCGGCGG ATGTTCTCCG ACGTCGAGGC CGACATCTAT GTGATGGCCG ACGGCGACGC GACCTATGAC GCCGCCGCGG CGCCGGAGAT GATCCGGATG ATGTTCGACG AGCGGCTCGA CATGGTGGTC GGCGCGCGCA AGTCGGAGGT CGAGGCCGCC TATCGGCGCG GGCACCGTTT CGGCAACCGT ATGCTGACCG GCCTGCTGGC GCGCCTGTTC GGACGGACTT TCTCCGATAT CCTATCGGGT TATCGGGTTT TCTCGCGACG GTTCGTGAAG AGCTTCCCGG TGCTCTCGGC GGGCTTCGAG ATCGAGACCG AGATCAGCAT CCACGCGCTG GAGCTGCAGA TGCCGGTCGG CGAGCTGGTC ACCCAATATG GCGCGCGGCC GGAAGGGTCG GCGTCGAAGC TGTCGACCTA TCGCGACGGC TGGCGCATCC TCTGGACGAT CGCGACACTG TTCCGGATCG AGAAGCCGAT GCTGTTCTTC GGGGTGATCG CGGCGGCGCT GGCGCTGTTC GCCGTGCTGC TCGCCATCCC GCTCGGCATC ACCTATTTCC AGACCGGGCT GGTGCCGCGG CTGCCCACCG CGATGCTCGC CACCGGGTTG ATGATCCTCG CCTTCCTCAA CCTGTTCTGC GGGCTGATCC TCGCCACCGT CGTGCGCGGC CGGCGCGAGG TGCGACGGCT CGCCTATCTC AGCTTCGCCG CGCCGGGCGG CGACGACCGC TCGATCGGCA GCACCACCGC CTGA
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Protein sequence | MTPDIAVILP CYNEEAAIGA TVAAFRRALP DARIYVFDNN SRDRTVEVAR AAGAIVRTER MQGKGHVVRR MFSDVEADIY VMADGDATYD AAAAPEMIRM MFDERLDMVV GARKSEVEAA YRRGHRFGNR MLTGLLARLF GRTFSDILSG YRVFSRRFVK SFPVLSAGFE IETEISIHAL ELQMPVGELV TQYGARPEGS ASKLSTYRDG WRILWTIATL FRIEKPMLFF GVIAAALALF AVLLAIPLGI TYFQTGLVPR LPTAMLATGL MILAFLNLFC GLILATVVRG RREVRRLAYL SFAAPGGDDR SIGSTTA
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