Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_0248 |
Symbol | |
ID | 5196737 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 254329 |
End bp | 255078 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640579788 |
Product | hypothetical protein |
Protein accession | YP_001260757 |
Protein GI | 148553175 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.581438 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0451182 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGTTCA AAGGCCGATC CTCCTTCCTC CTTTCGGCGC TCATCCTGGT CCCGGCGGCG GGGCAGGCGC AAAGCAGCGA AGATGTCGCC GACCTGGTCG GCGCCCGCGC CGCCGGGGCG GAGACCCAGA TGGAGGCGCG CGGCTATCGC GCGACGGTCA GCAACACCGT CCGCGACCAG CGCTTCACCT TCTGGTGGAA CGAGCGGAAA GGACGCTGCG TGTCGGTCTC CACCATCGAC GGCCGCTATG CCTCGATCGA TGCCGTCCCG CCGGGGAACT GCGACGCGCA GGACGCGTCC CGCCCAGCCT ATGGGGCGCA GCAGGCGCCC GGGCACGACG CGAAATCGCT GGTCCTCGTC TGCTACGGCG CGGGAACCAA GCCGACCGTC GAACCGTCGC GCTATGCTTG GAACCCGTGG AACCACAAAT GGGAATGGAG CACGCCCCAG AACGGCGCCA AGGGCTTCAG TTCCGACGTG CAGATCGAGC TCTACGGCGC TTCCGGCCGC ATCCATCTCG GCAAGAGCCT GGTGCCGCCG ATTCACTCGG GCGGCGACAA CGGCTGGTGG GACATCGAAA ACCTGGCGGT GACGCCGGAC CGGATATCGG GCAGCTACCG GCTCAACGGC ATGAACAAGC CGCGCTTCAC CGTCGATCGG CGCACCGGAC GGATCGAGGT CAAGGCCGTC ACCAATTTCG CCGGACAATG CGACATGGGC GACTGGGGCA AGGGCCAGCA CCGCTTCTAG
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Protein sequence | MTFKGRSSFL LSALILVPAA GQAQSSEDVA DLVGARAAGA ETQMEARGYR ATVSNTVRDQ RFTFWWNERK GRCVSVSTID GRYASIDAVP PGNCDAQDAS RPAYGAQQAP GHDAKSLVLV CYGAGTKPTV EPSRYAWNPW NHKWEWSTPQ NGAKGFSSDV QIELYGASGR IHLGKSLVPP IHSGGDNGWW DIENLAVTPD RISGSYRLNG MNKPRFTVDR RTGRIEVKAV TNFAGQCDMG DWGKGQHRF
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