Gene Swit_0240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_0240 
Symbol 
ID5196929 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp246774 
End bp247406 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content67% 
IMG OID640579780 
Productcarbonate dehydratase 
Protein accessionYP_001260749 
Protein GI148553167 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0288] Carbonic anhydrase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.615218 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.436149 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACT TCTCCGGGCT CATCGAGGGC TATCGCCGCT TCAAGGCGAA TGGCTGGAAA 
CAACAACGCG AACGCTGGAC GCAGCTCGCC AGTGGGCAGA ATCCCCGCTT GATGGTGATC
GCCTGCTCGG ACAGCCGGGT CGATCCGACG ATCATCTTCG ACACCTCGCC CGGCGAGATC
TTCATGGTCC GCAACATCGC CAACATGGTG CCGCCGTTCG AGACCACGGC GGGCCGTCAC
GGCGTCTCGG CGGCGCTGGA GTTCGCGGTG ACCCAGCTCG AAGTGCCCGA GATCGTCGTG
CTCGGCCACC AGAGCTGCGG CGGCTGCGCG GCGGCGCTCA CCCGCCGCTT CGAAAATGCC
GAGAAGGGCC AGGGCGGCTT CATCGCCGAC TGGATGTCGA TGCTCGACGA GGCGCGCGAC
AAGGTCGTCG CCGAGCATGG CCATGGCGAG GAAGCGGTGC GCGCGCTCGA ATGGGAGGCG
GTCAAGGTCT CGATCGCCAA CCTGCGCACC TTCCCCTGCG TGCCGATCCG CGAGCAGAAG
GGCAAGCTGA AGATCCACGG CGCCTATTTC GCGGTCGCCG ACGGCATCCT CCACCTGCTC
GACGAGGAAA CCGGCGAGTT CTCGCCGGCC TGA
 
Protein sequence
MTDFSGLIEG YRRFKANGWK QQRERWTQLA SGQNPRLMVI ACSDSRVDPT IIFDTSPGEI 
FMVRNIANMV PPFETTAGRH GVSAALEFAV TQLEVPEIVV LGHQSCGGCA AALTRRFENA
EKGQGGFIAD WMSMLDEARD KVVAEHGHGE EAVRALEWEA VKVSIANLRT FPCVPIREQK
GKLKIHGAYF AVADGILHLL DEETGEFSPA