| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0221 |
|---|
| Symbol | |
|---|
| ID | 5197420 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | + |
|---|
| Start bp | 219644 |
|---|
| End bp | 220204 |
|---|
| Gene Length | 561 bp |
|---|
| Protein Length | 186 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640579761 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001260730 |
|---|
| Protein GI | 148553148 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3159] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGAAGCG TGATCGACTT CGAGGGCGGC GCGATGGCCT CGCTCAAGCG GCGAATGGCC
GAGGTCGAGG AGGCCAATCA GGACCTCATC GCCTTCGCGC GCGGCCATTC GGGCGCGGTC
TCGTCGATCC ATGCCGCGGT GCTCGCGGCG ACCGAGTCGG ACGGGCTCGA TCATCTCATC
CACATCGTCA CCCAGGTCTG GCCCGACATG CTCGGCCTCG ACGCGGTGTC GGTCGCGCTG
TTCGTCGGCG ACCAGGGGCT GCGCGCCGAT GCGTCCGGCA TGCAGTTCGT CGAGCGCCGG
ATCATCGAGC GGTCGATCGT CGACATCGAA GGCGTGGTGA TGCGCAGCGT CGAGCGCGGC
CACCCGCTGT TCGGCCCGGC CTCCGAACTG ATCCGCGCCG AGGCGTTGAT CCGGCTGTCT
GCCGAGGCGC CGCTGCCGGG CGGGGTGCTC GCATTGGGCC AGCGCCGCCC GATGGGCTTC
GACACCCGCG CCGGCTCCGA ATTGCTGGGC TTCCTCGGCG CGATGCTTTC GCGCATGATA
GGGCGGTGGT TGCTGCCCTA A
|
|---|
| Protein sequence | MGSVIDFEGG AMASLKRRMA EVEEANQDLI AFARGHSGAV SSIHAAVLAA TESDGLDHLI
HIVTQVWPDM LGLDAVSVAL FVGDQGLRAD ASGMQFVERR IIERSIVDIE GVVMRSVERG
HPLFGPASEL IRAEALIRLS AEAPLPGGVL ALGQRRPMGF DTRAGSELLG FLGAMLSRMI
GRWLLP
|
|---|
| |