Gene Swit_0208 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_0208 
Symbolera 
ID5196712 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp208531 
End bp209424 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content70% 
IMG OID640579748 
ProductGTP-binding protein Era 
Protein accessionYP_001260717 
Protein GI148553135 
COG category[R] General function prediction only 
COG ID[COG1159] GTPase 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00436] GTP-binding protein Era 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAGC GCTGCGGCTT CGTCGCCGTC GTCGGTGCCC CCAATGCGGG CAAGTCCACC 
CTCGTCAACG CGCTGGTCGG CCAGAAGGTC GCGATCGTCA GCCCCAAGGC GCAGACCACC
CGCACCCGGC TGATCGGCGT CGCGATCGCG GGCGAGAGCC AGATATTGCT GGTCGACACC
CCCGGCATCT TCGCGCCGCG CCGCCGGCTC GACCGGGCGA TGGTCGCCGC CGCCTGGGGC
GGCGCGCAGG ACGCCGACCT GATCGCCTTC GTGATCGACG CCAAGACCGG CATCACCCAC
CGCATCGGCG AGCTGCTCGA CACGCTCGCC CAGCGGCGCG AGCCCAAGCT GGTGGTGCTC
AACAAGGTCG ACATCTGCTC GAAGGAGAGC CTGCTCGAAC TGGCCGTGCG CCTGCAGGAG
AAGCTCGCCC CCGAGGCGAT CTTCATGGTC TCCGCCGCGA CCGGCGACGG CGTCGCCGAC
CTGCGCCAGA CGCTGGCCGA CCGAGTGCCC GAGGGGCCGT GGCATTTCCC GGAGGAGCAG
GTCTCCGACG CCACCGACCG GATGCTCGCC GCCGAGGTGA CGCGCGAGCA GCTCTACCTC
CAGCTCCACG CCGAGCTGCC CTATGATTCG GCGATCGAGA CCGAGAAATA TGAGGAGCGG
CGCGACGGAT CGGTCGCGAT CCACCAGCAG ATCCTGGTCG CGCGCGACAC GCAGCGGGCG
ATCGTGCTGG GCAAGCGCGG CGTCCGCCTG AAGGAGATCG GCTCGCGCGC CCGCGCCGAG
CTGGAGACCC TGCTCGAACG CAAGGTCCAC CTCTTCCTCC ACGTCAAGGT CGCCGAGAAA
TGGGGCGAGG ACCGCGGCCT CTACCGCGAG ATCGGCCTCG ACTGGGTGGA TTGA
 
Protein sequence
MTERCGFVAV VGAPNAGKST LVNALVGQKV AIVSPKAQTT RTRLIGVAIA GESQILLVDT 
PGIFAPRRRL DRAMVAAAWG GAQDADLIAF VIDAKTGITH RIGELLDTLA QRREPKLVVL
NKVDICSKES LLELAVRLQE KLAPEAIFMV SAATGDGVAD LRQTLADRVP EGPWHFPEEQ
VSDATDRMLA AEVTREQLYL QLHAELPYDS AIETEKYEER RDGSVAIHQQ ILVARDTQRA
IVLGKRGVRL KEIGSRARAE LETLLERKVH LFLHVKVAEK WGEDRGLYRE IGLDWVD