Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_0198 |
Symbol | |
ID | 5201004 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 195277 |
End bp | 198078 |
Gene Length | 2802 bp |
Protein Length | 933 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640579737 |
Product | hypothetical protein |
Protein accession | YP_001260707 |
Protein GI | 148553125 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1743] Adenine-specific DNA methylase containing a Zn-ribbon |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.213354 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTCGA CGAATAATCC CAAGAAGAAG CTCATAGAGG TCGCGATCCC CCTCGAAGCG ATCAACGGGG CGTCGGCGCG CGAGAAGTCG ATCCGTCACG GACATCCATC CACGTTGCAC CTGTGGTGGG CGCGGCGGCC GCTGGCGGCG TGTCGCGCCG TGCTGTTCGC CCAGCTCGTC GACGACCCAT CGAGTCATCC CGATCTGTTT CCGACCCATG AGGCTCAGGA GATCGAGCGC AAGCGTCTGT TCGGGATCAT CGAAGACTTG GTGATCTGGG AAAACTCGAC GAACGAGGAG GTGCTGGACC GCGCCAAAGC CGAGATCCGC AAGAGCTGCG GCGGCGAATT GCCACCGGTC TACGATCCGT TTTCGGGCGG TGGATCGATC CCGCTCGAGG CGCAGCGTTT AGGTTTGCCA GCGTACGGAT CCGACTTGAA CCCGGTGGCG GTGATGATCG GCAAGTCGAT GATCGAATTC CCGCCTAGGT TTAAGGACAA GCCGGCGATC CATCCTGGCG TGAAGGAACG TCAATTCTAC AGAAATGCGG AGGGGCTGGC AGAGGACGTC AAATACTATG GCGGATGGAT GCGCGATAAG GCACGTGAAC GCATCGGGCA TCTTTATCCT CAGATAGACC TGCCGAAGGA ATACGGACGC GGTAAGGCGA CTGTGATCGC GTGGATCTGG GCGCGCACGG TGCCGAGTCC CGATCCTGCT TTCGGCAATG TACAGGTTCC CATCGCGGCG AGCTTCTTGC TGAATTCCAA GTCGGGCCAG GAGGCCTGGA TCGAGCCCAT CGTCGACCGA AATGCCAAGG CAATTACATA TCGCATTCGG CACGGCGGAG CGAAGTCCGA AATCGCCGCA GCAAAGCAGG GAACCAAAGC CGGGCGCGGC GCGAACTTTC GCTGCCTCAT GTCGGATACG GCGATCACAC CTGAATATGT GAAGCAGATG GGCCGAGATG GGCGTATGGG TCAGACGCTC ATTGCCGTCG TAGCGGAAGG CAACAGAAGT CGCTCCTATG TGGCTCCAAC TGAAGACCAG GAGGCCATCG CCTTTTCGGC GAAGCCTGAT TGGAAGCCAG AAACTAGCCT TCCGAATGAC CCACGGAATT TCTGGACGGT GGATTACGGC CTCACGACGT TTGGCGATCT GTTCACCGAT CGGCAGTTGG TGGCACTGAA CACCTTTAGT GACCTAGTGC ATGAAGCAAG AGCGCAGATC GAGACCGATG CCCTGGCCGC TGGCCTGTCC TCAGATCCCA CACCCCTGCG GGAGGGGGGC GCAAATGCGA AAGCATATGC CGAGGCAGTA AGCCTGTACC TGGCGTTTGC GATTGATCGC ATGGCAGATG CAGGTAGCTC GATCGCGACT TGGGCTAGCG GAGGCTTTAT TCGGTTTACC TTCGCACGCC AGTCGATTCC GATGACGTGG GATTTCGCTG AGTGTAATTT CTTCAGCGAC AGTACGGGAA ACTTTGGTGG CGCCGTCGAA TGGATTGTCC GAGCTATATC TGAGTTTCAG CCCCGGAATA ATGGTTCGCT GCGCCAACAG GATGCTCAGC AGGTCGTTCT GCCCGATATT GCTGCGATTT CGACCGATCC GCCTTATTAT GATAATATCG CATATGCCGA TCTCTCGGAT TTCTTTTATG TCTGGCTGCG GCGGGCTACG AAAGATGTAT TCCCTGACCT GACGGCAGTG CTAGCTGTCC CAAAATCTGA AGAGCTGGTC GCTACGCCAT ATCGACACGG TGGCAGAACG GGCGCTGAGC TATTCTTCTT AAACGGAATG ACGCAGGCCA TTGCCAGCCT CGCCCGTCAG GCGTCGTCCG AATTCCCGGC GACTATCTAT TACGCGTTCA AGCAGAGCGA AGTCGAAAAG GAGGGGCTAA GTTCGACGGG CTGGGCCACG TTCCTCCAGG CAGTAATTGA CGCTGGCTAT GCAATTGTGG GCACATGGCC GGTGCGCACC GAACGGTCTG CCCGCACGAT TGCGTCAGGC ACCAACGCAC TCGCCAATTC AGTGGTCCTC GTCTGTCGGA AGAAGGAGGC AGCCGCAGAG GTTGTCACTC GTGCAGAGTT TATCAGGGCC ATGAAACGTG AATTGCCGGC GGCGATCGCT GAGCTCCAAG CCGCTAACAT TGCCCCAGCC GACATGCCGC AATCGGCCAT TGGCCCCGGG ATGGGCGTGT TCTCGCGCTA TAAAGCCGTT CTTGGCTCCG ACGATACCCC AATGAGCGTG AAAGGCGCGC TTCAACTCAT CAACAAGGAA CTCGACGAAT ATCTGGGCGG CATCCAGGGC GAATTTGACG CCGACACGCG GTTTGCCATC ACCTGGTTTG AGCAATACGG GCTCGGCAAG GGCGATTACG GCACTGCCGA CAATCTCGCC CGCGCCCGTG GCATCTCGGT CGAAAGCGTG AAACATGCCG GGATCGTGGA CAGCGCTGCC GGCAAGGTTC GCATTCTTGC TCGCGACGAG TTGGATGATG GTTGGGAGCC GGAGAGTGAC GGCCATCTGA CCGTTTGGGA ATGCCTCCAG CACCTCGTTC GGCGGCACGA GAAGGACGGC ACCTCTCACC ACACGGCTGT CCTTCTGAAG AAGATCGAGG CCATGGCCGA AGCAGTGAAG GATCTTGCCT ACTGTCTGTA CGATATTTCC AGCAACAAGC GGAAAGATGC GAAGGAAGGC AATCCATACA ACGCCTTGAT CGCCGATTGG ACCGAGCTGA CGCGACAGGC GGCAACAATC CACGACACGA GTGGCGACCG CCAAGCCCGG CTGGATATTT GA
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Protein sequence | MTSTNNPKKK LIEVAIPLEA INGASAREKS IRHGHPSTLH LWWARRPLAA CRAVLFAQLV DDPSSHPDLF PTHEAQEIER KRLFGIIEDL VIWENSTNEE VLDRAKAEIR KSCGGELPPV YDPFSGGGSI PLEAQRLGLP AYGSDLNPVA VMIGKSMIEF PPRFKDKPAI HPGVKERQFY RNAEGLAEDV KYYGGWMRDK ARERIGHLYP QIDLPKEYGR GKATVIAWIW ARTVPSPDPA FGNVQVPIAA SFLLNSKSGQ EAWIEPIVDR NAKAITYRIR HGGAKSEIAA AKQGTKAGRG ANFRCLMSDT AITPEYVKQM GRDGRMGQTL IAVVAEGNRS RSYVAPTEDQ EAIAFSAKPD WKPETSLPND PRNFWTVDYG LTTFGDLFTD RQLVALNTFS DLVHEARAQI ETDALAAGLS SDPTPLREGG ANAKAYAEAV SLYLAFAIDR MADAGSSIAT WASGGFIRFT FARQSIPMTW DFAECNFFSD STGNFGGAVE WIVRAISEFQ PRNNGSLRQQ DAQQVVLPDI AAISTDPPYY DNIAYADLSD FFYVWLRRAT KDVFPDLTAV LAVPKSEELV ATPYRHGGRT GAELFFLNGM TQAIASLARQ ASSEFPATIY YAFKQSEVEK EGLSSTGWAT FLQAVIDAGY AIVGTWPVRT ERSARTIASG TNALANSVVL VCRKKEAAAE VVTRAEFIRA MKRELPAAIA ELQAANIAPA DMPQSAIGPG MGVFSRYKAV LGSDDTPMSV KGALQLINKE LDEYLGGIQG EFDADTRFAI TWFEQYGLGK GDYGTADNLA RARGISVESV KHAGIVDSAA GKVRILARDE LDDGWEPESD GHLTVWECLQ HLVRRHEKDG TSHHTAVLLK KIEAMAEAVK DLAYCLYDIS SNKRKDAKEG NPYNALIADW TELTRQAATI HDTSGDRQAR LDI
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