Gene Swit_0193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_0193 
Symbol 
ID5196912 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp184862 
End bp186058 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content67% 
IMG OID640579732 
Producthypothetical protein 
Protein accessionYP_001260702 
Protein GI148553120 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACTG TCCTTTCCCA ACCCGACCGG CCTGCCGCCG CAGCCGCCTA TAGGGTCGAC 
ATTTCCCGCG GCCAGCGCAT CGGCCGCGTT TCCTCCGAAT GGTTCTCGCG GCCCGACGAC
GAACGCTACC TGTCGCTCAC CGAGCTTCAT GCTGCGGTGA AGGCCCGCGC GGAGCGAGCC
GCGACCCGGA CGGTCGAGAC CCAGGAAGTC CGGGTCGAGG CGGATCGCGA CAATGCCGAG
CGCCTCGCGC TTGTCATACC CGGGCGGGAC GCGCCGGTCG CGCCCACACA TTGGTCGTTC
GGCCAGCTTT GCAGCCTGGT CGGTGCGCCG TCTTCCTACC TGCGCGCGCT TCCGGCGCCG
CTCGCCGGCA TCAATCTGCA GCACGGCCTC TTGGCTCACC GCGCCGAGCT CGTGAAGACT
CTGGAAACCG AGGACGGCCG CACCGAGCTG CGCGCCGTCA CCGGTCCGGA CTATGGCCGG
ATCTGGGATC ACGAGCTGGT CGCCGCGGCC ATGCAGATCG CCGGCAACGG GACCGGCGAC
ACACGCTGGA AGGTGCCGGG TGTGCTCGAC TGGTCGACCA TGACCCACAA CCCCTTCGTC
GAAGTGACCA AGGACACGAC GACCCTCTAC GCGAGCGACC GCGATGTCTT CCTGTTCCTC
GTCGATGATG CTCATCCGAT CGAGGCCGGC CGACTCCCCA ATGGCGATCC AGACCTCTAT
TTCCGGGGCT TCTACTGCTG GAACAGCGAG GTCGGCTCGA AGACTCTCGG CGTGGCGAGC
TTCTATCTTC GCGCGGTCTG CATGAACCGC AACATCTGGG GCGCTGAAGG TTTCGAGGAG
ATCAGCATCC GGCACTCGAA ATTCGCCGCC AATCGCTTTG CGCATGAGGC TGCGCCGGCG
CTGGAGCGGT TCGCCACCTC CTCGCCCGCG CCGTTCATGG CCGGCATCAA GCAAGCGCGC
GCCCAGATCG TCGCCCGCGA CGACGACGAC CGCCAGGACT TCCTGCGCAA GCGCGGGTTC
TCGAAAGGAG AGACCGAGAA GATCATCGCC ACCGTGCTCG ACGAGGAAGG CCGGCCGCCG
GCCTCGATCT TCGACTTCGT GCAGGGGATC ACGGCCGTCG CCCGCGCGAA GCCGCACCAG
GACGCGCGGC TCGCGCTCGA AGCGAGAGCC GGCAAAATGC TCGCCGCTGC GCGGTAA
 
Protein sequence
MATVLSQPDR PAAAAAYRVD ISRGQRIGRV SSEWFSRPDD ERYLSLTELH AAVKARAERA 
ATRTVETQEV RVEADRDNAE RLALVIPGRD APVAPTHWSF GQLCSLVGAP SSYLRALPAP
LAGINLQHGL LAHRAELVKT LETEDGRTEL RAVTGPDYGR IWDHELVAAA MQIAGNGTGD
TRWKVPGVLD WSTMTHNPFV EVTKDTTTLY ASDRDVFLFL VDDAHPIEAG RLPNGDPDLY
FRGFYCWNSE VGSKTLGVAS FYLRAVCMNR NIWGAEGFEE ISIRHSKFAA NRFAHEAAPA
LERFATSSPA PFMAGIKQAR AQIVARDDDD RQDFLRKRGF SKGETEKIIA TVLDEEGRPP
ASIFDFVQGI TAVARAKPHQ DARLALEARA GKMLAAAR