| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0172 |
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| Symbol | |
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| ID | 5196876 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 163608 |
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| End bp | 163835 |
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| Gene Length | 228 bp |
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| Protein Length | 75 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640579711 |
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| Product | XRE family transcriptional regulator |
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| Protein accession | YP_001260681 |
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| Protein GI | 148553099 |
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| COG category | [K] Transcription |
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| COG ID | [COG1396] Predicted transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.134297 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.353283 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGACATTC GCAAGCTGGT CGGCGGCAAT GTTGCACGGC TACGTAAGAA GACAGGATTG
AAGCAGGAGC CGTTCAGCGA AGCTGCGGGG ATCAGCCAGT CGTACCTGAG CCAGATAGAG
AATGGGCACG TCAATTTGAC TCTTCTGGGC GTGAACGACC TGGCCCAGGC GCTCGGTGTG
CCGCCCATTG AGCTGTTTCG TGAGTTGTCG GAGATGAATC CGGACTAA
|
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| Protein sequence | MDIRKLVGGN VARLRKKTGL KQEPFSEAAG ISQSYLSQIE NGHVNLTLLG VNDLAQALGV
PPIELFRELS EMNPD
|
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