| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0168 |
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| Symbol | |
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| ID | 5196872 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 160603 |
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| End bp | 161292 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640579707 |
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| Product | conjugal transfer protein TrbF |
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| Protein accession | YP_001260677 |
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| Protein GI | 148553095 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3701] Type IV secretory pathway, TrbF components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 0.577326 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.249503 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCCCT TTCGCCGCCC CTCGTCGCGG TTCGGCCGCG AGCCGAAACC CGAGACGCCC
TATCAACGTG CCCAGCAGGC CTGGGACGAT CGCATCGGCT CCGCGCGGGC GCAGGCCTAC
AGCTGGCGGC TGATGGCGTT CGGCGCGATT GCGGTGCTCG GCCTGTCGGC CGCCGACAAT
CTGCGCCTGC GCTACGGCAC GAAGGTTGTG CCCTATGTGG TCGAGGTCGA TCGCCTCGGA
GCGGCGCGCG CCGTCGCTCC TTTGGAGGCC GGCTATCGGC CGACCGATCC GCAGATCGCG
TGGCACCTCG CCCGCTTCAT CGAGAATGTC CGCGCCCGGC CCGCCGATCC GATCGTGCTG
CGGCAGAATC TGAGCGCCGC CTATGATTTC ACGACCGAGC AGGGCGCGGC GTCGCTCAAT
GACTATGCCC GCGCCAACGA CCCGTTCGCC AGTCTCGCCG ACACCCAGGT CGGGGTCGAC
ATCCGCAATG TCGTGCGCGC CTCGGCCGAC AGCTTCCGCA TCGCCTGGGA CGAGCGCCGC
TATGTGCGGG GCCAGCTGGC CACGACGACG CGCTGGTCGG CGGTGCTTAC CATCGTCGTG
CGCACCCCGA CCGACGCCCC GACGCTGAGC CGCAACCCGC TCGGCCTCTA CGTCCACGCC
CTCAACTGGT CCCAGGATCT CGGAGACTGA
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| Protein sequence | MNPFRRPSSR FGREPKPETP YQRAQQAWDD RIGSARAQAY SWRLMAFGAI AVLGLSAADN
LRLRYGTKVV PYVVEVDRLG AARAVAPLEA GYRPTDPQIA WHLARFIENV RARPADPIVL
RQNLSAAYDF TTEQGAASLN DYARANDPFA SLADTQVGVD IRNVVRASAD SFRIAWDERR
YVRGQLATTT RWSAVLTIVV RTPTDAPTLS RNPLGLYVHA LNWSQDLGD
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