Gene Swit_0156 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_0156 
Symbol 
ID5200264 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp150906 
End bp151238 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content64% 
IMG OID640579695 
ProductXRE family transcriptional regulator 
Protein accessionYP_001260665 
Protein GI148553083 
COG category[K] Transcription 
COG ID[COG2944] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.551998 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGCGA AGACGAAAAG TAAGCGGGCC GCCAGCCCGA TCCTGGCGTC GGTGCACGAG 
GCGGCGGCCG ACCTTCACGA GCTTGGCCTC GTCGACAAGG CGACAATGCG CGAGTTCGAC
GCGTTCTGTC TTACGCCGGT CGAGCCGCTG TCGCCGGCCG AGATCCGGTC GCTACGGGAA
CGCGAGCACG TCTCCCAACC CGTGTTCGCG CACTATCTCA ACGTGCGAAA GGATGCCGTG
AGCAAGTGGG AGCGCGGCGA GAAGAAGCCG GATGGTCCCT CGCTCAAGCT GCTCAATCTC
GTCCGGGCAA AGGGGTTGCA GGCTATCGCT TGA
 
Protein sequence
MVAKTKSKRA ASPILASVHE AAADLHELGL VDKATMREFD AFCLTPVEPL SPAEIRSLRE 
REHVSQPVFA HYLNVRKDAV SKWERGEKKP DGPSLKLLNL VRAKGLQAIA