| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0149 |
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| Symbol | |
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| ID | 5199818 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 143975 |
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| End bp | 145570 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640579688 |
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| Product | hypothetical protein |
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| Protein accession | YP_001260658 |
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| Protein GI | 148553076 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1808] Predicted membrane protein |
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| TIGRFAM ID | [TIGR00271] uncharacterized hydrophobic domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.739878 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.754825 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACGT CCAACGCGGA GCATGGCATG GTCGACACGG TGAAGATGCG CATCGAGCGC
GTTCCCCTCT ATCGCTGGTG GCGGCGCGCG ATCGTCGGCA GCGTGGACCA TCAGGAGATC
ATCGAGCGCA TCTTCGTCGA CGGCAAATGG TCGCCGCGCT ACGCCTTCAT GACGATGATG
TCGGCGGGGA TCGCGATCCT CGGCCTGCTG CTCTCCTCCC CCGCCGTGAT CATCGGCGCG
ATGCTGATCT CCCCGCTGAT GAACCCCATA TTGGGGCTGG GCTTCAGCAT GGCGCTGTTC
GATTTCGCGG AGATGCGCCG GTCGCTGATC GCACTGGCCG TCGGTTCGCT GGCGGCGATA
TTGTTCACCG CGCTGATCGT CGCGATCTCC CCCTTGCAGG CGCCGACTCC CGAGATCATC
GCCCGCACCC GGCCCAACCT GTTCGACCTG GCGGTGGCGC TGTTCGCGTC GCTGGCCGGC
ACCTTCGCGA TCATCCGCGG GCGTGGCGAC ACCATCGTCG GCGTGGCGAT CGCGACCGCG
CTGATGCCGC CGCTGGCGGT CGTCGGCTTC GGCCTGGCGA CCTGGAACAT GGCGGCGTTC
GGCGGCGCGC TCGCGCTGTT CGTCACCAAT TTCGTGACGA TCGCGCTCTC CGCGACGGTG
ATGGCCCGCT ATTATGGCTT CGGCCATCAT CTATCGAGCC AGCAGAGCTG GACCCAGACC
TTCATCCTGT TCTTCGTGTT CGTCGCGATG GCGATCCCGC TCGGCATCTC GCTCGAACGG
ATCGCCGGCG AGGCAGTGAC CACCAACAGG GTCCGCTCCT TCCTCTCCAA GCAGTTCGGA
GCGGAGGCGC GCGTGACCCA GCTCGAGATC GACTTCGCCG CACAGCCGCT GTCGGTCCGT
TCGGTGATCA TCGCCCCCCG CAACGGCGCC CGCCCGGTCG GGACGTTGCA GGCCGATCTC
GAAAGGCAGC TCGACCGGCC GGTGCAGTTG CGCCTCGACC AGGTGCTGCT CGATCCCCGC
GCGGGCGCGA TCGACGTCCA GCGCGAGCAG TTGCGCCAGG CCGAACACAG CGCGGCCATG
GAGACCAACC GTATTTCGGC GGTTTCGCAG GCGCTCGCGG TCTCGGCCGG GGTCGATATC
GACCAGATCA CGATCGACCG CGAGCAACGC CGCGCCACCG TCAACGCCGC ACAGCTTCCG
GGAGCGACGA TCGAGACCTA CCATGCGCTG GAGAAGCGCG CCGCGGCCCA GGCCGAAGGC
TGGACCATCG CCATCGTTCC GCCGCAGGGC GCCCTGCCCT CGATCGGCTT CGTCGATGGC
GGGGATGCGC TCGACCCGGC CGGTCAGGCC GCCCTGTCGA CATCGGCCTG GGCCGCGCGC
CGCTGGAACG TGCCCGCGCT GGGCGTCCCC GGACTGCCGC GCCTCCCCTC GGCCCGGCCG
AACCTCGTGG AGCGAAGGGC CCAGGCGGTC GCCGCGCTGC TGCGGGCGCA GGGGATCGAA
GCCGTGCCGG CCCGGACGAC GGGACGCGGC TTCGTGCTGA CCGTCGTCCA GGGGGAAGCG
ACATCCTCGT CGCTCCCGCG CGGGCCCGGC TCATGA
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| Protein sequence | MTTSNAEHGM VDTVKMRIER VPLYRWWRRA IVGSVDHQEI IERIFVDGKW SPRYAFMTMM
SAGIAILGLL LSSPAVIIGA MLISPLMNPI LGLGFSMALF DFAEMRRSLI ALAVGSLAAI
LFTALIVAIS PLQAPTPEII ARTRPNLFDL AVALFASLAG TFAIIRGRGD TIVGVAIATA
LMPPLAVVGF GLATWNMAAF GGALALFVTN FVTIALSATV MARYYGFGHH LSSQQSWTQT
FILFFVFVAM AIPLGISLER IAGEAVTTNR VRSFLSKQFG AEARVTQLEI DFAAQPLSVR
SVIIAPRNGA RPVGTLQADL ERQLDRPVQL RLDQVLLDPR AGAIDVQREQ LRQAEHSAAM
ETNRISAVSQ ALAVSAGVDI DQITIDREQR RATVNAAQLP GATIETYHAL EKRAAAQAEG
WTIAIVPPQG ALPSIGFVDG GDALDPAGQA ALSTSAWAAR RWNVPALGVP GLPRLPSARP
NLVERRAQAV AALLRAQGIE AVPARTTGRG FVLTVVQGEA TSSSLPRGPG S
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