Gene Swit_0148 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_0148 
Symbol 
ID5199817 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp143619 
End bp143978 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content66% 
IMG OID640579687 
Productresponse regulator receiver/SARP domain-containing protein 
Protein accessionYP_001260657 
Protein GI148553075 
COG category[T] Signal transduction mechanisms 
COG ID[COG3947] Response regulator containing CheY-like receiver and SARP domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACG CCGTCATCGT CGTCGTCGAT GACGACCCCA GGATCTCGGC GACCTTGCTG 
AGCGCCCTCG CGGAGACCGG CCTGGAGGCC CGGGCCTTCG CGGACGGCGA AGGAGCGCTC
GACTATCTGG CCGGCGGTAG CGAGACGCCG GCGTGCATCG TCACCGACAT CAACATGCCG
GGAATGTCGG GATGGGAATT CGCCAAGCGC GCGCGATTGC TGCTGCCCCG GCTGGGGGTG
GTCTATATCA GCAGCGAATG CATGGACGAC TGGCGCCTGA AGGCGGTGGC CGACAGCCAT
TTCCTGCCCA AGCCGTTCGT GCGCGACCAG TTGCTCAGGG CGATCGCGGC GTTGATCTGA
 
Protein sequence
MSDAVIVVVD DDPRISATLL SALAETGLEA RAFADGEGAL DYLAGGSETP ACIVTDINMP 
GMSGWEFAKR ARLLLPRLGV VYISSECMDD WRLKAVADSH FLPKPFVRDQ LLRAIAALI