Gene Swit_0112 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_0112 
Symbol 
ID5198865 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp109235 
End bp109762 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content72% 
IMG OID640579651 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001260622 
Protein GI148553040 
COG category[R] General function prediction only 
COG ID[COG3153] Predicted acetyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.148335 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATCACGC TCACCCCCAT CGCCGCCGTC GCCGCTTCGC ACGTCGAACA TCTGCTCGAT 
CTCGCCTTCG GCACCGACCG GCACCAGCGA ACCGCCTACC GGCTGCGCGA AGGGGTGGAA
GCGCTGCCGG ACCTGAGCCT CGCGGCGCTG GAGGATGGCG AGCTGATCGG ATCGATCCAG
TGCTGGCCGA TCCAGCTCAC CGGGGACGAT GGGGACAGCA CGCCGCTGAT CCTGGTCGGC
CCGGTCGCGG TAGCCCCCGG CCGGCAGCGC GCCGGGGTCG GCCGCATGTT GATGGACGCG
GCGCTCGCCA AGGCCGACGC GGCGGACCGC GAGCCGATGA TGCTGATCGG CGACGTCAGC
TATTATGAAC GCTTCTTCGG CTTCTCGTCG CGGCATACGC GCGGCTGGGC GGTTCCGGGC
CCGGTCGAGC GCGACCGGCT GCTGGCGCGA TTGCGCCCCG GCCAGGTGGT TCCGGGCCAC
GGCCGGCTCG GCCCCCGCGT CGCGGCCCTT GTCCCCGGCG ACGATTGA
 
Protein sequence
MITLTPIAAV AASHVEHLLD LAFGTDRHQR TAYRLREGVE ALPDLSLAAL EDGELIGSIQ 
CWPIQLTGDD GDSTPLILVG PVAVAPGRQR AGVGRMLMDA ALAKADAADR EPMMLIGDVS
YYERFFGFSS RHTRGWAVPG PVERDRLLAR LRPGQVVPGH GRLGPRVAAL VPGDD