Gene Swit_0110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_0110 
Symbol 
ID5198998 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp108042 
End bp108647 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content74% 
IMG OID640579649 
ProductNUDIX hydrolase 
Protein accessionYP_001260620 
Protein GI148553038 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.04219 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCGC TGGCCGACCG GCTGCGCGGC AGCTTCGCCG ACGCGCGCGA CGACGCCCCC 
CTTGTCGACG AGATCGGCCT GGTCGGCGAC ATCGCGACGC TGACCCGCGC CGCCGTGCTG
GTGCCGATCA TCGAGGCCCC CCGCCCCCGC GTGCTGCTGA CCGTGCGCCA CGAGGCGCTG
CGCGCGCATG CCGGGCAGGT CGCCTTTCCC GGCGGCCGGC TCGATCCCGA GGACGGCGGC
CCGGTCGACG CGGCGCTGCG CGAGGCGTGG GAAGAGGTCC GCCTGCCGAG CGAGCGGGTC
GACGTGGTCG GCACGTCGCG TCCCTATGCG ACCCGGTCGG GCTATCTGAT CACCCCGGTC
GTCGGCGTCA TCCCCGAGGG GATCGAGCTC CACCCGCAGG AGGCCGAGGT CTCGGGCCTG
TTCGAGGTGC CGCTCGACGT GCTGCTGGCG GAGGCCAACC ATCTGCGCCG CTCGGTGATC
TTCGAGGGCC GCCCGCGGCA ATATTATGAG ATCGACTGGC CCGACCAGCG CATCTGGGGC
GTGACCGCCG GGCTGATCGT CGAGCTCGCC CCCCGGCTGC GCGGCGCGCT GGAGAGAGCC
GCATGA
 
Protein sequence
MTALADRLRG SFADARDDAP LVDEIGLVGD IATLTRAAVL VPIIEAPRPR VLLTVRHEAL 
RAHAGQVAFP GGRLDPEDGG PVDAALREAW EEVRLPSERV DVVGTSRPYA TRSGYLITPV
VGVIPEGIEL HPQEAEVSGL FEVPLDVLLA EANHLRRSVI FEGRPRQYYE IDWPDQRIWG
VTAGLIVELA PRLRGALERA A