| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0106 |
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| Symbol | |
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| ID | 5198448 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 101719 |
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| End bp | 102603 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640579645 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001260616 |
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| Protein GI | 148553034 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCGAC AGATCCCGCC GCTCAGCGCG GTGCGCGTGT TCGAGGCTGC GGCCCGGCAC
CTCAACTTCA CCCGCGCCGC CGAGGAACTG GCGATGACCC AGGCGGCGGT CAGCTACCAG
ATACGGATGA TCGAGGATCG GCTGGGCACG CCGCTGTTCG TGCGCAGCGG CCGGCGCGTC
TCGCTCAGCC CGGCGGGGCA GCGGCTGGCG CCGGCCGTCA CCGCTGCGTT CGACCGGCTC
GACGAGGCCT TCGCCAAGGT CCGTCTCGCC GAAAGCGGGG TGCTGACGAT CAGCGCCGCG
CCCGGCATCG CCGCGGGCTG GCTCGGCCCG CGCCTCGCCC GCTTCCAGCT CGCCAAGCCG
GATATCGCGG TGCGGCTGCT CGCCAGCCAC GAGCTGGTCG ACTTCGCCCG CGACGAGGTC
GACGTCGGCA TCCGCATCGG CCAGGGCGAG TGGCCGGGGC TGCGCGCGAT CGAGATGTTC
GGCGCCGAGT TCACGCCGAT GTGCAGCCCG GCCTATATCG ATCGGATGGG GCCGTTCACC
GATCCGGCCC AGCTTCTCGA CACGCTGCGG ATGAACTCTG ACGACGTCTG GTGGCGGGCG
TGGTTCGCGG AGGTCGGCGT CGCCGTCCCC GACGATCTCG ACCGTGGGTC GATCCACGTC
GACTCGCAGG TGATCGAGGG CATGGCGGCG ACGGCCGGGG AGGGGGTGGC GATGCTGACG
CCGCGCTTCT GGCCGTTCGA GCTCGCGACC GGGCGGCTCG TCCAGCTCTT CCCCCATGTC
GGCGACGGCG GCAGCTTCTG GCTGGTCTAT CCCGAGCATC GCCACGGCTC GTCCAAGGTG
AAGGCCTTTC GCGAGTGGCT GATGGCCGAA GTGCGGGCAT CCTAG
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| Protein sequence | MARQIPPLSA VRVFEAAARH LNFTRAAEEL AMTQAAVSYQ IRMIEDRLGT PLFVRSGRRV
SLSPAGQRLA PAVTAAFDRL DEAFAKVRLA ESGVLTISAA PGIAAGWLGP RLARFQLAKP
DIAVRLLASH ELVDFARDEV DVGIRIGQGE WPGLRAIEMF GAEFTPMCSP AYIDRMGPFT
DPAQLLDTLR MNSDDVWWRA WFAEVGVAVP DDLDRGSIHV DSQVIEGMAA TAGEGVAMLT
PRFWPFELAT GRLVQLFPHV GDGGSFWLVY PEHRHGSSKV KAFREWLMAE VRAS
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