Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_0103 |
Symbol | |
ID | 5198445 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 97623 |
End bp | 98303 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 640579642 |
Product | hypothetical protein |
Protein accession | YP_001260613 |
Protein GI | 148553031 |
COG category | [R] General function prediction only |
COG ID | [COG3545] Predicted esterase of the alpha/beta hydrolase fold |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.156412 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCGGCAC CCCGTTTCGA ACATCCTTCC GCAGCGCCGC TGACGCTGCT GCTGCCCGAC CTCGACGGCG GGGAGCCGGG CTATTGGCTG CGCCACTGGA TCGACAGCCG GATCGACTGC CGGCTGGTCG ACCTCGGCCA GGCGCGCCGT CCCGATCGCA ACAGCCTCGT CACCCGCCTC GACCATGCGC TGCGCCGTCT CGACGCGCCG GTCATCCTCG TCGGCCATGG GGTGGGGGCG CTGACCATCG CCGCCTGGGC CGGGCTGATG AGCAGCGAGA GCGAGGCGGC GGTCGCCGGC GCGCTGCTGA TCGCGCCGGG CGACCCCGCG GCGGCCGACG CCGATCCGCG CCTGAGCGAT TTCGCGCCGC TGCCGTCGGA GGTCTTCTCC TTTCCGGCGC TGCTCGTCGC CAGCGACGAC GATCCCGCGC TGTCGCCCGA TCGCGCCTTC AGCCTGGCGC GCCAATGGGG CGCCGGCTTC GCCCGCTTCG GCGCCTGCGG CCATTTCGCG CCGGCCGACG GCCTCGGCTG GTGGCCCGAG GGCGAGGAGC TTCTCGATCG CTTCATCGAC CTGGTCGAGC CGGGGCGTGT CCGGGCCCAG GCGCAGGACG GGCTCGACCG GCTCGCCCAA AGCCTGCCGC CGCGCGATCG CGGCTCCTCC TCTCCGCTGT TCCGTCCCTA G
|
Protein sequence | MAAPRFEHPS AAPLTLLLPD LDGGEPGYWL RHWIDSRIDC RLVDLGQARR PDRNSLVTRL DHALRRLDAP VILVGHGVGA LTIAAWAGLM SSESEAAVAG ALLIAPGDPA AADADPRLSD FAPLPSEVFS FPALLVASDD DPALSPDRAF SLARQWGAGF ARFGACGHFA PADGLGWWPE GEELLDRFID LVEPGRVRAQ AQDGLDRLAQ SLPPRDRGSS SPLFRP
|
| |