Gene Swit_0103 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_0103 
Symbol 
ID5198445 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp97623 
End bp98303 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content74% 
IMG OID640579642 
Producthypothetical protein 
Protein accessionYP_001260613 
Protein GI148553031 
COG category[R] General function prediction only 
COG ID[COG3545] Predicted esterase of the alpha/beta hydrolase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.156412 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGCAC CCCGTTTCGA ACATCCTTCC GCAGCGCCGC TGACGCTGCT GCTGCCCGAC 
CTCGACGGCG GGGAGCCGGG CTATTGGCTG CGCCACTGGA TCGACAGCCG GATCGACTGC
CGGCTGGTCG ACCTCGGCCA GGCGCGCCGT CCCGATCGCA ACAGCCTCGT CACCCGCCTC
GACCATGCGC TGCGCCGTCT CGACGCGCCG GTCATCCTCG TCGGCCATGG GGTGGGGGCG
CTGACCATCG CCGCCTGGGC CGGGCTGATG AGCAGCGAGA GCGAGGCGGC GGTCGCCGGC
GCGCTGCTGA TCGCGCCGGG CGACCCCGCG GCGGCCGACG CCGATCCGCG CCTGAGCGAT
TTCGCGCCGC TGCCGTCGGA GGTCTTCTCC TTTCCGGCGC TGCTCGTCGC CAGCGACGAC
GATCCCGCGC TGTCGCCCGA TCGCGCCTTC AGCCTGGCGC GCCAATGGGG CGCCGGCTTC
GCCCGCTTCG GCGCCTGCGG CCATTTCGCG CCGGCCGACG GCCTCGGCTG GTGGCCCGAG
GGCGAGGAGC TTCTCGATCG CTTCATCGAC CTGGTCGAGC CGGGGCGTGT CCGGGCCCAG
GCGCAGGACG GGCTCGACCG GCTCGCCCAA AGCCTGCCGC CGCGCGATCG CGGCTCCTCC
TCTCCGCTGT TCCGTCCCTA G
 
Protein sequence
MAAPRFEHPS AAPLTLLLPD LDGGEPGYWL RHWIDSRIDC RLVDLGQARR PDRNSLVTRL 
DHALRRLDAP VILVGHGVGA LTIAAWAGLM SSESEAAVAG ALLIAPGDPA AADADPRLSD
FAPLPSEVFS FPALLVASDD DPALSPDRAF SLARQWGAGF ARFGACGHFA PADGLGWWPE
GEELLDRFID LVEPGRVRAQ AQDGLDRLAQ SLPPRDRGSS SPLFRP