Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_0040 |
Symbol | |
ID | 5200499 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 39831 |
End bp | 41738 |
Gene Length | 1908 bp |
Protein Length | 635 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640579577 |
Product | acyltransferase 3 |
Protein accession | YP_001260551 |
Protein GI | 148552969 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1835] Predicted acyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.578182 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTAAGG CGCACATGTC GGCGCACAGG TTCCGGCCCG ATATCCAGGG GCTGCGCGCA TTGGCCGTGC TGCCCGTCGT GGCCTTCCAT GCCTTTCCCG ACCTGCTGCC CGGCGGCTTC GTCGGGGTCG ACATCTTCTT CGTCATCTCG GGCTATCTGA TCACCCGCAT CCTCCATCAG GAGTTGCGCG AGGGGCGGTT CAGCATCGCC GGCTTCTACG TCCGCCGGGT GCGGCGGCTG TTTCCCGCGC TCTACCTGAT GCTGTTCGCG ACGATGCTGC TCGGCCTCGT CCTGCTGCCG CCGCACGAGC TGCGCGAGCT GGCGAAGACC GTCGCCGCGA CGGTCGGCTT CGTCGCCAAT TTCCTGTTCT ACGACCTGTC GGGCTATTTC GGCGGAGAGG CCGAGCTCAA GCCGCTGCTC CACACCTGGT CGCTCGCGGT CGAGGAGCAG TTCTACCTGG TCTTCCCGCT CGCGCTGGCG GCGGTCTGGC GGCTGCGGCC GCGCTGGCTG CCCGCGATCC TGTGGGCGGC GGCGGCACTG TCGCTGGCCT GGAGCGTCCG CGAACTGGGG CAGGACGCGT CGCGCGCCTT CTATTATCCC TGGCCGCGCG CCTTCGAGCT GCTGATCGGC GCGATCGTCG CGGTGGGGGC GATCCCGCAG GCCCGCCATC AGGCGGTCCG CGACGGGCTG TCGCTGCTCG GCATCGCGCT GATCGCGGCC TCGCTATTGC TGCTGTCGGA GGAGCGGCCC TTTCCGGGGC TCGCCGCGCT GCCGCCCTGC ATCGGCGCGG CGCTGGTCCT CGCGGCGGGG GAGGAGGGCG AGTCGCTGGG TGGCCGGATG CTGGGCGCGG CGCCGCTCGT GCTGGTCGGT TCGCTCTCCT ATTCGCTCTA TCTCTGGCAT TGGCCGGCGC TGGTGTTCGG CCGCTATCTC GCGCTGCGCC CGCTGACCGC GCCCGAGGCG ATCGCGGCGG TCGCGGTCGC CTTCGCGCTG GCCTGGGCGT CGTGGCGCTA TGTCGAGAGC CCGGTGCTGA AATGGCGGCT GCCGCGCCGG CGGGTGCTGG CCGGCGGCGG CGCGATGATG GCGGCGACGG CGGTGCTCGC CGCGGCGGTG GTGCTCGGCC GGGGGCTTCC CCAGCGGCTC GACCCGATGG GGCGGACGCT GATCGCGGCG GCCGGCGACA GCAGCGATTT CCGCGCCACC TGCCATAGCG GCGAGCATGG AGCGATCCCC TATCGCAAGC TCTGCGCGTT CGGCGATCCG CGGGCGGCGC CGAGCATGGC GGTCTGGGGC GACAGCTTCG GCGCCGAACT GGTGGTGGCG CTGGGCGAGA AGATGGCGCG CGAGCGCCGG TCGGTGCTGC AGGTCACCGC GTCGGGCTGC CCGCCCGCGC TCGGCTATAA CCCCCGGCGG CGGCCGGGCT GCGCCGCCTA TAATGCCGAA CGCCTCGCCG AACTCGCCGC CGATCCGCGC ATCCGGGAGG TGGTGCTGGT CGTCAATTAT CTGGGCTTCA TGGCCGACAC GCCCGCCCAG CAGGCGGCGC TGCTCGACGG GGTCGAGCGG ACCGCGCGGG CGCTTCACGC CGACGGCAAG ACGCTGAGCC TGGTCTACTC GATCCCGCGC ATGCCCTTCG TGGCGCCGAC CGCGCTGGCG ATGGAAAGGC TGCGCGGCGG CGATCCGTCC GATTTCGGCC AGCGTCGCGC CGATTTCGAC CGGCGCGACG CGATCGTCTC GGCCCGGCTC GACCGCATCG TCCGCGAGAC AGGAGCCGAT CGGATCGTGC CGGCGCAGCG GCTCTGCGGC GACCGGCTCT GCCCGGCCTA TATGCCCGGC GCCGGGGTGC TCTATTTCGA TCATGCGCAT CTCAGCATCG CCGGCGCGCG CTATATGCTG GCCGGCGTCC GCGTCTGA
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Protein sequence | MGKAHMSAHR FRPDIQGLRA LAVLPVVAFH AFPDLLPGGF VGVDIFFVIS GYLITRILHQ ELREGRFSIA GFYVRRVRRL FPALYLMLFA TMLLGLVLLP PHELRELAKT VAATVGFVAN FLFYDLSGYF GGEAELKPLL HTWSLAVEEQ FYLVFPLALA AVWRLRPRWL PAILWAAAAL SLAWSVRELG QDASRAFYYP WPRAFELLIG AIVAVGAIPQ ARHQAVRDGL SLLGIALIAA SLLLLSEERP FPGLAALPPC IGAALVLAAG EEGESLGGRM LGAAPLVLVG SLSYSLYLWH WPALVFGRYL ALRPLTAPEA IAAVAVAFAL AWASWRYVES PVLKWRLPRR RVLAGGGAMM AATAVLAAAV VLGRGLPQRL DPMGRTLIAA AGDSSDFRAT CHSGEHGAIP YRKLCAFGDP RAAPSMAVWG DSFGAELVVA LGEKMARERR SVLQVTASGC PPALGYNPRR RPGCAAYNAE RLAELAADPR IREVVLVVNY LGFMADTPAQ QAALLDGVER TARALHADGK TLSLVYSIPR MPFVAPTALA MERLRGGDPS DFGQRRADFD RRDAIVSARL DRIVRETGAD RIVPAQRLCG DRLCPAYMPG AGVLYFDHAH LSIAGARYML AGVRV
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