| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_5109 |
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| Symbol | |
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| ID | 5195882 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009508 |
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| Strand | + |
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| Start bp | 218704 |
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| End bp | 219780 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640579535 |
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| Product | IS4 family transposase |
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| Protein accession | YP_001260483 |
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| Protein GI | 148551053 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3666] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 48 |
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| Plasmid unclonability p-value | 0.0975401 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.0840327 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTCAGG CAGGATTGTT CGGTTTGTCG GATCAGCTGA AGCGGTTGTC GGACTGCGGG
GATCCGCTGG AGACGATGAG CCGGGTGGTG GACTTCGAGG TGTTCCGCCC GGCGCTGGAG
AGGGCGCTGG CGTACGGCGA CGGCGCCAAG GGTGGTCGGC CACCCTACGA TCCGGTGGCG
ATGTTCAAGG TGCTGATCCT GGCGGCGCAG AACACGGTGA GCGACGCGCG CATGGAGTTC
CTGATCCGCG ATCGGCTGAG CTGGTTACGG TTCCTGGGCT TCGACCTGGG CGCGGTCACG
CCCGACGAGA ACACGATCCG GCTGTTCCGC GAGAAGCTGA CCCGCGCCGG TGCGATCGAC
GCGCTGTTCG CCGCCTTCGA CCGGCAACTG CGCGACCGCG GCTATCTGCC CATGGGAGGG
CAGATCGTGG ACGCGACCCT GGTGGCGGCG CCCAAGCAGC GCAACACCGC GGCCGAGAAG
GAAGCGATCA AGGCGGGCAA GAGCGCAACC CAGATCTGGC CGGACCAGCC GGCCAAGGCG
GCGCAGAAGG ATGTCGACGC GCGCTGGACT CTGAAGTTCG CTAAGGGTCG GCCGCTGCTC
GGCGGCAAGC CGGGGATCGA CATCGCCATC CCGAGCTTCG GCTACAAGAG CAGCATCGCG
ATCTGCCGAC GCTATGGCTT CATCCGCCGG GGCAAGGTCA CCGATGGCGC CCGCTTCGAC
GGCCGCATGC TGCGCGACGT GGTGACCAAC GACAACACCG CCTCCGACGT GTGGGCGGAC
ACCGCGTACC GCAGCCGGTC CAACGAGGCC TGGCTGAAGT CGGTCGGCCG GGTCAGCCGC
GTCCACCGCA AGAAGCCCAA GGGCAAGCCG ATGTCGGCAC GCACTGCGCG CGCCAACGCT
GCCAAGTCTA CCGTCCGTGC CCGCATCGAG CATGTGTTCG CCCGCCAGAA GGATCAGATG
GCGCTGTTCA TCCGCACCAT CGGCATCGCA CGCGCCGAGA CGAAGATCAC CCTCGCCAAC
CTCGCCTACA ACATAGACCG CCTGATCTTC CACGAACGAC GAGCAGCCAT GGGATAG
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| Protein sequence | MRQAGLFGLS DQLKRLSDCG DPLETMSRVV DFEVFRPALE RALAYGDGAK GGRPPYDPVA
MFKVLILAAQ NTVSDARMEF LIRDRLSWLR FLGFDLGAVT PDENTIRLFR EKLTRAGAID
ALFAAFDRQL RDRGYLPMGG QIVDATLVAA PKQRNTAAEK EAIKAGKSAT QIWPDQPAKA
AQKDVDARWT LKFAKGRPLL GGKPGIDIAI PSFGYKSSIA ICRRYGFIRR GKVTDGARFD
GRMLRDVVTN DNTASDVWAD TAYRSRSNEA WLKSVGRVSR VHRKKPKGKP MSARTARANA
AKSTVRARIE HVFARQKDQM ALFIRTIGIA RAETKITLAN LAYNIDRLIF HERRAAMG
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