| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_5071 |
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| Symbol | |
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| ID | 5195916 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009508 |
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| Strand | - |
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| Start bp | 186108 |
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| End bp | 187610 |
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| Gene Length | 1503 bp |
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| Protein Length | 500 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640579503 |
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| Product | integrase catalytic subunit |
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| Protein accession | YP_001260451 |
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| Protein GI | 148551021 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 65 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCGGGTT GCCAAGTCAA CGATCATCAA ATGAGGCTTT TCATGAAATT GCGACAGACC
AACCCGGTCC CGGTGGCTGC GGCGAAGGCC GGGTTCAGCA CCGCGACGGG CTACCGGATC
GCGAGCGATC CGGTGCTTCC TTCACACCGT AAAGCGCCCC GCGGCCGACG GCGACCTGAT
CCGTTGGAAT CGATCTTCGA GAGCGAGATC GTACCAATGC TGAAGGCGGC ACCTGGCTTG
CGGGCGGTGG CGATCTTCGA GGAGATGCGC CGTCGCCATC CCGATCTCGA TTTTGGGGTT
CGCCGCACGA TGGAGCGTCG TATCCGTGCC TGGCGGGCCG TTCATGGCCC GGAACAGGAA
GTGATCTTCC GCCAGACTCA TGAGCCGGGG CGAATGGGCC TTTCGGACTT CACCGACATG
AGGAGCCTCA AAGTCACGAT CGCGGGTGCG CCCCTCGATC ACCTGCTTTA CCACTTCCGC
CTGGTGTGGT CAGGCTTCGA ACATGCCCAT GTCATCCTGG GCGGCGAGAG CTATGTCGCA
TTGGCTGAGG GGCTGCAGAA CGCGCTTTGG ATGCTGGGCG GCGCGCCGGG CGAACACCGC
AGCGACAGTC TGTCGGCCGC GTTTCGCAAC CTTGATGCCG ATGCCCGTGC GGACTTGACC
ACACGCTACG ACGCCTTGTG CGAACATTAT GGCATGACGC CGACCCGCAA CAACCGCGGC
ATCGCACATG AGAATGGCAG CGTCGAAAGC TCCCACGGCC ATCTCAAGGC GGCGGTGGAG
GATGCGCTGG CGATGCGTGG ATCGACCGAC TTCGAGGACC TCGCGGCCTA TCGCAGGTTC
ATCGACGAGA TCGTTGCCCG AAAGAACCGG CGCAGTGCCG CCCGCATCGA CACCGAAAGG
GCAACGCTCA AACCGCTACC TGATCGTCGC ACCAGCGACT ACGAGGAACA TATCCTTCCC
GTCACCTCGT CCAGCACCTT CGTTCTGCGC AAGGTGTTCT ACACGGTGCC GTCACGGTTG
ATCGGGCATC GACTGCGTGT GCGCCTCTAC GATGATCGGC TCGATCTGTT CCTGGGCGGC
AGTTATCTCA TGACCCGGCC ACGCGGTCGC CCGAAAAGCG CTACCGAACA TGGCTATGTG
GTGGATTACC GTCACGTGAT CCATAGCCTC AGGCGTAAGC CGATGGCCCT GCTGCAGCTG
ACCTATCGCG ACCAGTTGTT CCCGCGCGAG GCGTACAGGC TCATGTTCGA ACGGCTGCTC
GAAGCCATGT CCGAGCGTGA CGCTTGCCGT AAGATGGTCG AGTTGCTGTC CATGGCCCAT
GAACGGGCCT GCGAGGCCGA GCTTGCCGAT CTTCTCGCCC AGGACCTTGA CGAAGGCCGG
CTGCCTGACA TCGCCGCGTT GCGAACGCGC TTCTCGCCCG ATCCGGCCGC GCTGCCCGAG
GTGGTGGTCG AGCTTGGCCC CCTGACCGAC TACGATGCCC TGCTGCTGGG AGAGGCCGCA
TGA
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| Protein sequence | MPGCQVNDHQ MRLFMKLRQT NPVPVAAAKA GFSTATGYRI ASDPVLPSHR KAPRGRRRPD
PLESIFESEI VPMLKAAPGL RAVAIFEEMR RRHPDLDFGV RRTMERRIRA WRAVHGPEQE
VIFRQTHEPG RMGLSDFTDM RSLKVTIAGA PLDHLLYHFR LVWSGFEHAH VILGGESYVA
LAEGLQNALW MLGGAPGEHR SDSLSAAFRN LDADARADLT TRYDALCEHY GMTPTRNNRG
IAHENGSVES SHGHLKAAVE DALAMRGSTD FEDLAAYRRF IDEIVARKNR RSAARIDTER
ATLKPLPDRR TSDYEEHILP VTSSSTFVLR KVFYTVPSRL IGHRLRVRLY DDRLDLFLGG
SYLMTRPRGR PKSATEHGYV VDYRHVIHSL RRKPMALLQL TYRDQLFPRE AYRLMFERLL
EAMSERDACR KMVELLSMAH ERACEAELAD LLAQDLDEGR LPDIAALRTR FSPDPAALPE
VVVELGPLTD YDALLLGEAA
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