| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_5012 |
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| Symbol | |
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| ID | 5195947 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009508 |
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| Strand | - |
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| Start bp | 128698 |
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| End bp | 129567 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640579446 |
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| Product | regulatory protein, LuxR |
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| Protein accession | YP_001260394 |
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| Protein GI | 148550964 |
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| COG category | [K] Transcription |
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| COG ID | [COG2771] DNA-binding HTH domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 69 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.136049 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTTTTGA TACGGGGAGC TGCCCGAGGG ACGCATCCGG TCTTGTTTTT CAATGGCTTC
GCCGAACAGC GACTGGACGA AACCGCAACC GAAATGCGAA CCGTTCGCAC TATGAGCAGT
CTCGACGATG CCAGCCGCCT AGGCGATATC ACCGCATTCG AAGCCGAATG CCGGCAGGCG
ACGACGCTCG ATCAGGTCAA ATCCTTGCTC GATGCGATCG TGCGACAGTT CGGGTTCCGC
TGGTTCGCAT TGGTGCACAA TGTCGACTTG AAACGGACCA CCTGCAAAGC ACTCCTGATA
ACCACCTATC CGGTACGCTG GATTGAGGAA ATCATGGAGT CACGACTCTA TCTTGAGGAT
CCGGTTCATG CCGCTTGCGT CAAAACCGTC TCCGGCCTCT CCTGGGATCA GATCGGCGAT
TATATCGCCC CCAATGCCCG CCAGCTTTCG ATCCTTGAAC GGGGTCGCGC ACATGGACTG
GCATCTGGGT TTACTATGCC GATCAGGATG CGCGATGAGC CTGACGCGAT GTTTACAGTA
GCGCGGCAAG GCGATGAGAC GATCTCAAGC CCGGACCTTC TCTGTGCCCG ATTGATTGGC
ACGGTTGCAT TCGACCAGGC CCGAACCCTT CTCGGTCCCG ATGAACTGGC AAACGTGCCA
ATAGCGCTCA GCCCGCGCCA GATCGACTGC ATTGATCTGG TGGCACAGGG CAAGAGCGAC
TGGGAGATCG GACAGATCCT GGGTCTGAGC CGCGACACTG TCCATGAATA TGTCGAAGGT
GCGCGCCGGC GGTATGGCGT GCGTCGCCGG ACCCAGCTCG TGCTTCGCGC TGTCCGAGAC
GGACATCTGA ACATCGACGC GCTCGTCTAG
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| Protein sequence | MLLIRGAARG THPVLFFNGF AEQRLDETAT EMRTVRTMSS LDDASRLGDI TAFEAECRQA
TTLDQVKSLL DAIVRQFGFR WFALVHNVDL KRTTCKALLI TTYPVRWIEE IMESRLYLED
PVHAACVKTV SGLSWDQIGD YIAPNARQLS ILERGRAHGL ASGFTMPIRM RDEPDAMFTV
ARQGDETISS PDLLCARLIG TVAFDQARTL LGPDELANVP IALSPRQIDC IDLVAQGKSD
WEIGQILGLS RDTVHEYVEG ARRRYGVRRR TQLVLRAVRD GHLNIDALV
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