| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4998 |
|---|
| Symbol | |
|---|
| ID | 5196060 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009508 |
|---|
| Strand | - |
|---|
| Start bp | 114316 |
|---|
| End bp | 115146 |
|---|
| Gene Length | 831 bp |
|---|
| Protein Length | 276 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640579433 |
|---|
| Product | transcriptional regulator-like protein |
|---|
| Protein accession | YP_001260381 |
|---|
| Protein GI | 148550951 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG5340] Predicted transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 64 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCGCGAAG GATATAATCT CAAGACGCTT GGACCTCGGG CCGCCCAGCT GATCGTCGAA
CTTAACGAAC GCCGTCAGCC GATCTTTTCG CTCGCGGACG TCACCGAGAT CACAGGTCTG
AGCCCGTCAT CAGCACGCAG TCTCGTCGCG AACACCGAAG CACGCGGCAT CGTCACGCGC
CTCAAGCCCG GCCTTTACAA TCTCGTGCCA TTCGAGCGGG GCCGCGACAC CGAGCATGTG
AGCGATCCCT ACCTCATCGC CAGGACTCTG GTTGGCGACG CGCCCTATTT CATCTCCCAC
GGCAGCGCCC TCGAGCTGCA CCGCATGGTC ACCCAACCGC AGTTGGCCAT CATCGTCTCC
TGCGCCAAAC GACTGCGCCC GCAGCACATC CACGGGTATG AGTTCCGCTT CGTCGACGTC
AAACCAAAGG ATTTCTTCGG CCTGACCGAG ATCTGGATCA CACCCGAAGA GCAGGTCCGG
ATCAGCGATC CCGAGCGGAC CATCATCGAT GGTCTCGACC ATCCGCAATA TGTCGGTGGC
GTCACGGAGG TCGCCAAGGG ACTCTGGATG AAGCGCGATA CGCTACGGAT CGAACTAATG
ATCGACTACG CGCTTCGACT CGGCGTTGGC GCGGTAATCC GGCGCCTGGG CTATCTGCTG
GAATTTTACG GGCTGGCCGA TGCAGCCGCA TTGGAGCCGC TGCGCGCGCG GCTGACCCCG
ACCTATCAGC GTCTCGATCC CCTGTTTCCT AACGAGGGCC GAATGCTGGC CCGATGGCGC
ATCCGACTCA ACGTCGAGCC TGACGAACTC GATATGATCC GGAGCAGTTG A
|
|---|
| Protein sequence | MREGYNLKTL GPRAAQLIVE LNERRQPIFS LADVTEITGL SPSSARSLVA NTEARGIVTR
LKPGLYNLVP FERGRDTEHV SDPYLIARTL VGDAPYFISH GSALELHRMV TQPQLAIIVS
CAKRLRPQHI HGYEFRFVDV KPKDFFGLTE IWITPEEQVR ISDPERTIID GLDHPQYVGG
VTEVAKGLWM KRDTLRIELM IDYALRLGVG AVIRRLGYLL EFYGLADAAA LEPLRARLTP
TYQRLDPLFP NEGRMLARWR IRLNVEPDEL DMIRSS
|
|---|
| |