| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4997 |
|---|
| Symbol | |
|---|
| ID | 5195946 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009508 |
|---|
| Strand | - |
|---|
| Start bp | 113573 |
|---|
| End bp | 114316 |
|---|
| Gene Length | 744 bp |
|---|
| Protein Length | 247 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640579432 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001260380 |
|---|
| Protein GI | 148550950 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2253] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 63 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATACCCC AGCGCGATCT CTCCCGTATC GCCAACGGCC TTCTCACGCC ACGCGGCCGC
CGCGTGCCTG AGGCGGTGAT CGAACGCGAT TATTGCCTGG CTTGGTTCCT GACCGCTCTG
GCCCAGCATC CCTTGCGCGA ATTTCTCGCC TTCAAGGGCG GGACGGCATT GCGCCGCTGC
TGGTTCGAGA ACTACCGCTT CTCCGAGGAT CTCGATTTTT CGCTGATCAA GCCGATCGAC
CTGGACGCGA TCCTCTCCGG CCTGAACGAG ATCTTTGCCA TCGTCGACGC GGCGTCGGGG
ATCAGCATGG CCTTTGACCG GCCCGACCGG CATGGCCATC AGAACACCCA CACCTTCTAT
TTGAGCTACA AAGGCCCCCT GCCCGCCCGT AGCGACGTGA AAGTCGATAT CACGATCAAT
GAGGTGTTCT GCTTTCCGCT GGCCGAGCGT CCGATCCTGC GGACATTCGA GGAATTTGCC
GACCTGCCGG AAGGCCCGAC CATTCAGGCC TACAGCCTGG CGGAGATATT CATCGAGAAG
CTCGCGGCAC TGTCGGACAA GGCCCGCACC GAGCCGCGTG ATCTCTACGA CCTTTGGAAT
CTGCTTGAGG AACGGGACAT CCGACCAGCG GAATATCTTG GCGAGTTTAC CCAGAAGCTC
ACTCTGCGGG AGCGCATACC CAATGGGGGG GGTGACCGCA GCGATCGCCG CCAAGGAGAA
GCGACTGGGC ACGCTATGGA CTAA
|
|---|
| Protein sequence | MIPQRDLSRI ANGLLTPRGR RVPEAVIERD YCLAWFLTAL AQHPLREFLA FKGGTALRRC
WFENYRFSED LDFSLIKPID LDAILSGLNE IFAIVDAASG ISMAFDRPDR HGHQNTHTFY
LSYKGPLPAR SDVKVDITIN EVFCFPLAER PILRTFEEFA DLPEGPTIQA YSLAEIFIEK
LAALSDKART EPRDLYDLWN LLEERDIRPA EYLGEFTQKL TLRERIPNGG GDRSDRRQGE
ATGHAMD
|
|---|
| |